Pseudomonas sp. 2-92, U367_RS0109845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00547
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042953 lipoprotein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00547
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35869 OUTER-MEMBRANE LIPOPROTEIN CARRIER PROTEIN IPR004564 Outer membrane lipoprotein carrier protein LolA-like 2 207 4.3E-49
SUPERFAMILY SSF89392 Prokaryotic lipoproteins and lipoprotein localization factors IPR029046 Lipoprotein localisation LolA/LolB/LppX 27 206 9.42E-48
Gene3D G3DSA:2.50.20.10 Lipoprotein localisation LolA/LolB/LppX - - 24 206 2.2E-53
NCBIfam TIGR00547 JCVI: outer membrane lipoprotein chaperone LolA IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria 8 204 8.9E-27
Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria 10 207 29.11841
CDD cd16325 LolA IPR004564 Outer membrane lipoprotein carrier protein LolA-like 26 189 4.35036E-44
Pfam PF03548 Outer membrane lipoprotein carrier protein LolA IPR004564 Outer membrane lipoprotein carrier protein LolA-like 35 197 6.8E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.