Strain | Pseudomonas aeruginosa U2504 genomic scaffold adgfx-supercont1.9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGCTGCGCCTGGAGGCCGAGTTTGACGCCATAGCCGCTGGCGCCGAGCCGGACCTGGCGGCATGGGTCGCAGCTGTCCAGGCGATCAAAGCGCGGTAT CCACTACCTGAATAGGTAGTTGTGATGGCGTTCTCGTTTTTGCCACGTTCCGAAAGTCTGATGTCGAGTAGTAGATAGGAACCTTGGGATGGACGAGGTA CTGAGGCAAAGGTTGCGGGCTGAACTACTGGAAGTGGGGTTTCTCAACCAGTGCTGCCTTGATCTCATGGAAAGCATGGAGGCTGAGTTCAGTCTCACTA AGGACCAGCGCGAGTGCATCGAGCAGCTCAGCCGATTTCTACGGGAGGGCATCGGCAAGCTGACCGCTCTGTCTGAACGGGTAGCCGATGGCGATATCGT CGTCCTGTGCTGACCTTTTGAAATTCTTTTGCCGCTGGCGAAACGGTTAGGGCGCGTCATTTATTGCGCAAATCCGCGCCAAATTTCGCGCCGCGCTACA
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DNA Sequence for Gene |
>Q009_06628
GTGGTGGCGCTGGGCGGCGAGAGCAAGCTGGTCGGGGTGGACACCACCAGCCAGCATCCGCAGGCGCTGAAACAGTTGCCGAGCGTCGGCTACCAGCGCC AACTGGCTGCCGAGGGCGTGCTGGCGTTACGCCCGGATATCCTCATCGGCACCGAGGAAATGGGGCCTCCGCCGGTACTCAAGCAGCTCGAAGGCGCCGG CGTGCGGGTCGAGACCCTCTCCGCCAAGCCGGATCTGGAGGCACTGGAAAGCAATCTGAAGAAGCTCGGCGACTGGCTCGGCGTGCCCCAGCGCGCCGAG GCCGCCGAACTTGACTATCGTCAGCGGCTGCGGCGCCAGGCGGACTGGATCGCGGCCGCGCAGAAGAGTCAGCCGGCCCCGGGCGTCCTGCTGGTGATCG GCAACGCCGGGGGTCAGTTGCTGGTAGCCGGGCGCAATACCGGCGGCGATTGGGTCCTGAACCGAGCCGGAGCACGCAACCTGGCTACCCATGAGGGTTA CAAGCCGATCTCGGTGGAAGCCCTGGCAGCGCTCGATCCGGTCGCGGTGGTGATCGCCGACCGCAGCCTCGAAGGTGATGCGGCGCGTGCCGCGCTGCTC AAGCAGAACCCCGGCCTCGCCGCGACTCGCGCGGCGCGTGACGGACGTCTGCTGGTGCTTGACCCGACGCTCCTGGTGGGCGGCCTCGGTCCGCGCCTGC CGGATGGCCTGGCGGCTCTCTCCGCAGCCTTTTATCCTTCCGCGAAACCGCTGAGTACGGAAGCCGCCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATCGGTTGTTCGCCCCCGCGCACTGTTCGGTGCGCTGGGGATTTCGCTCGTGTTGGTCCTCTGGTTGTCCCTCGCCCTCGGTCCCGTCAGCCTGCCGCT GGGCGATACCCTGCGCGCCGCGCTGCGCCTGGCCGGGCTGCCGCTCGATGGAACGGGCCTGGCCCAGGCGGAAATGATCCTCGGCCAGATCCGCCTGCCG CGGACCCTGCTCGGCCTGGCCGTGGGCGCGGTGCTGGCGCTGTCCGGGGTGGCGATGCAGGGCCTGTTCCGCAACCCGCTGGCCGATCCAGGGCTGGTCG GGGTGTCCAGCGGCGCGGCCCTCGGCGCGGCGCTGGCCATCGTGTTCGGCGCCTCGCTGGGTGGCTTGCCGGCGTTCCTAGCGCCCTACCTGCTGTCGCT GTGCGCCTTCGGCGGCGGCCTGGGGGTGACCTGGCTGGTCTATCGACTTGGCCGCCGCGATGGCCAGACCAGCGTGGCCACCATGTTGTTGGCAGGGATC
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Amino Acid Sequence |
>hypothetical protein
MVALGGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAE AAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARNLATHEGYKPISVEALAALDPVAVVIADRSLEGDAARAALL KQNPGLAATRAARDGRLLVLDPTLLVGGLGPRLPDGLAALSAAFYPSAKPLSTEAAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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