Pseudomonas aeruginosa BWHPSA007, Q020_04174
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA007 genomic scaffold adgeP-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACGCCGCGAACGAGGCGAAGAACGCGAAGCCCTTCAAGCCTTGCAGCGGCACCAGGCCATGCAGGGCCTTCCAGGTCGCCGCGTTGTAGAACACCACC AGAACCAGCGCGAACAGCATCACCAGCCGGGTCGAACCGATAGCCGGCAAGAAACGCTTGATACCCCCACCCATTGAAGCAACTCCTGAAACGTAACGGA CCGCCGCCACCCCCCGTGGCGGGGCGCCCGAACTCTATCGGGCGCCTGGTCAAAATTTCGTGAAGCCTCGCGAGCCCTCGCGGGCGCAGCGATCATGCCC GTGGCGATGGAGCCGGAACAAGCTCAGCTATGCCTTTTCTCCCCGGGAAAATGCCGAAACCGGCCGTATGTCGGCGGCCAGCGACTTCCTTCCATGCCGA CCTTGCAGGTGGCTCCCGCTATCTATACTGGAAGCACAATGCCACCCCCAGCCCGCACCCGCGCCGTCCGCGGGTTTTCCGTGTCCAGGGAGACACCGCT
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| DNA Sequence for Gene |
>Q020_04174
ATGGATTGGCAAGGCCTGCGCTTCCTCGGAGAGTCTCCCGTCGACGGCTACGTGCTGCAGAACTGCACCTATTCGCCGTCGCTGGTGGCGCTCGCCTTCC TCGTCGCCTGCCTCGCCGGGTACACGGCACTGGACATGGTCGAGCGGGTCGGCAACAGCCTGAGCCACCCGCGCCTCTGGCAATGGATCGGGGCGTTCTG CCTGGGCAGCGGCATCTGGGCCACGCATTTCGTCGCCATGCTCGCGTTCCACGCGCCGATCGCCCTGCGCTACGACCTGCCGATCACCGGCCTGTCGCTG CTGATCGCCGTCGCCGCCTCGTACCTGGCGATGTACATGACCGCCCGCCCGCGCTTCGGCCTGCTGCCCTGCCTGCTCGCCGCCTGCTGCATCGGCCTGG GCATCGCTGCCATGCACTACACCGGGATGGCGGCGATGCGCTCGGTGGCCACCCAGTACTACCAGCCATCGCTGTTCGCCCTTTCGGTACTGATCGCCAT CGGCGCCGCCTTCACCGCCCTCGCCGCGGTCCCCTACCTGCGCGGCCGGCGCAGCGCGCGCTACCGCTACATGAAACTGATCGCCAGCCTGCTGCTGGCC GGCGCCATCGCCGCCATGCATTTCACCGGGATGGCCGCGCTGGTGCTCAGCGTACCCGCCGGCACGCCGCTGGAACTGCAAGCCAGCGCCGACTCGCTGC GCCTGGGCTGGCTCACCGGAGTGCTCGCCAGCGCCATCGCCGCCTGCGGCATCTGGGCCGCATGGTCGGAGAAACAACGGGAGCGCCGGCTCAGCGAAAA CAGCCGGGTCAACGCCCTGCTCAACCAGCTCGACCACGCCCACGCCTCGCTGCGCCAGATGGCTCGCTACGACAGCCTGACCGGCCTGCAGAACCGCACG GCATTCAACGAAGTGTTCGTCCAGCACCTGGAGAATTGTCGCCTGAGAGGCAAGGGCCTGGCGGTGATGTTCCTCGACCTCGATCACTTCAAGCGGATCA ACGATTCCCTCGGCCACGACTCTGGCGACCAACTGCTGAAGATCGTCTCCGAACGCATCCGCAGCGTGTTGCGCGATAGCGACGTGGTGGCGCGCTTCGC CGGCGACGAGTTCTGCGTGCTCGCCGACCTCACCCAGGACCACGAGGCGCACATCCTCTCGCAACGCCTGATGCAGAAGATGAAGGAACCCATCGCCCTG GACGGGCGCACCCTGGTGATGACCGCCAGCGTCGGCGTCAGCCTCTACCCGAACGACGGCGAGCAGTGCGAGGAGCTGCTGAAGAACGCCGGCCTGGCCC TGCACCAGTCCAAGGCCTGCGGGCGCAACAACGCGCAGTTCTTCAGCCGGCAACTGCTGGTGCGGGCGACCCAGGAACTGCAGATGGAGGAGGAACTGCG CCAGGCCCTGCGCGACGACCAACTGGAGCTGCACTACCAGCCGATCCTCGCCCTCGCCGACGGCGAGGTACACCAGTTGGAGGCATTGGTGCGCTGGCGC CATCCGACCCAGGGCCTGCTCGGTCCGGACCGCTTCATCGGCCTGGCCGAAGCCAACGGCATGATCGACCAGCTCGACGACTGGGTGCTGCGACGCGCCT GCCGCGACCTGCGCAGCCTGCACCTGGCCGGCCACGAACGGCTGCGGGTGGCGGTCAACTGCTGCGCCAGCAATCTCGGCCGGGCCAGCCTGGTCGACGA AGTCCGTCATGCGCTGGAGCAGGCCGGGCTGGCGGCGTGCTTCCTCGAACTGGAGGTGACCGAGGACGCGCTGATGTACAACATCGACCAGACCATCCCG CTGCTCGAACGCCTCCGCGAGCTGGGCGTCAGCCTGTCGATCGACGACTTCGGCACCGGCTATTCGTCGCTCGCCTACCTGCGGCGCCTGCCGCTGGACG CGCTGAAGGTGGATCGCTCGTTCATCATGGACATCCCCGCCTCGCAGCGGGACATGGAAATCGCCCAGGCGATCATCGCGATGGCCCAGAAGCTCCATCT GAAAGTCGTCGCCGAGGGCGTGGAGACCCCGCAGCAACTGGCGTTCCTGCGGGAGAACCATTGCGAGCTGGTGCAGGGCTACCTGTTCAGCCGGCCGCTG CCGCTGGCGGCCCTGGAAGAGTTCCTCCGCGCCTACCGCTTCGACGCCGCGCCGCCGCTGCGCAGCCTGAACCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTCACTCGACGGCGGTCCGGTATTGCTCCACCAGGGTCGCCGGATCGCGTTCGAGATAGCCCTGGCTGCCGTGCAGACGCATCAACTGCGCGGCCAAC CCGCTCATCGGGGTGGCCGCGCCTTGCTCGCGGGACAGCTTCACCGCGGTATCGAGATCCTTGAGCAGGGTCCGTACGTGCCACTTGACCGGCTCGTAAC GGCTCTCGGCCATTTGCGGGGCGAGGATCTGCAACGGCTTCGAGTCGGCGAAGCCGCCCGCCAGCGCCGGAGCGACCAGGCTGGCGTCGACCCCGGCCCG CTCCGCCAGCGCCACCACTTCGGCGATCACCAGGGCGTTGCAGGCAACGATCATCTGGTTGCAGACCTTGGTCACCTGCCCGGCGCCCACCTCGCCCATG CGCGTCAGGCGCTGGCCAAGCCGGGAGAGGACCGGCCGCAGGCGTTCGATATCCGCTGCGCGTCCGCCGGCCATGATCGCCAGGCTGCCGCTTTCCGCGC
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MDWQGLRFLGESPVDGYVLQNCTYSPSLVALAFLVACLAGYTALDMVERVGNSLSHPRLWQWIGAFCLGSGIWATHFVAMLAFHAPIALRYDLPITGLSL LIAVAASYLAMYMTARPRFGLLPCLLAACCIGLGIAAMHYTGMAAMRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLA GAIAAMHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGVLASAIAACGIWAAWSEKQRERRLSENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRT AFNEVFVQHLENCRLRGKGLAVMFLDLDHFKRINDSLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFCVLADLTQDHEAHILSQRLMQKMKEPIAL DGRTLVMTASVGVSLYPNDGEQCEELLKNAGLALHQSKACGRNNAQFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWR HPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRVAVNCCASNLGRASLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIP LLERLRELGVSLSIDDFGTGYSSLAYLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFLRENHCELVQGYLFSRPL PLAALEEFLRAYRFDAAPPLRSLNQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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