Strain | Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGACTTCCTCGACCCGCACGGTGAAGGCGCACGCTGGCAGTCCTACCTGGAAGCGCTGGACGCCTTCTTCCTGCGCGGACAGCAGAAAGGCGTGTTTCG CATCGACATCACGGCGGCCGTGTTCACCGAACTGTTCATCACCCTGGTCTACGGCATGGTCGATGCGGAACGTCGCGGACGGGCGGCCAGCTCCAATTCC GCGCATACCCTGGAGCAGATGTTCCTCCATGGCGCCTCCAATCCGGCTCGCTCCTGACCCTCGCACCCGCGGCGGCGCCCCTCTCGTCGCCGCATGGCAC GGACCGATCCGCGTGCCGTCGACTTCGGCCGCCCGGAGGCCTGCTCGACACTCGGGAAGATCAGTCCTCACCGGCCCTGCGACAAAGTGCCTCGACAGCC GGAAAGGACCGTGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATCCTAACTGTCTACCGAATCACACCTCCCCCAGGAATTCCGGTCA
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DNA Sequence for Gene |
>Q036_04203
GTGTCGACCCCCTCGCTAACCCCGTCGCCGCCTCCCGCCGGCGACCCACTGACCGTACCCGACCGACCGGCAGCCAAGGCTGGCCTGCTGTTGCTGGTCC TGTTGATGCTCGGCCTGCTGCTCTGGCAGATGAGCCAGGAGCTGCGCCAGCAGGAACGCTTCGAACACGAGCGAGCCGCGGCCCAGCTCGATCGTCTCAA CGACCGCCTGTCCCTGACCCTCGAACTCAAGGCGCGCACCGCCCTCGCCCTGCTCCCGGGCGTGCCCCCCAGCGAGCGTGGCGAGATACAGGGCAGGCTG TTGCCGCGCATCAGCGATGCGCTGCCGCAGGTGCGCCAGTTGCAATGGGTGGACAGCGCCCCGCAGACGGACAGCCCGTCGCCGGAAACGACGCTGCCCG AGCAGTTGCGCCAGCACGCCGGCTCCGGCCTCTACCACTATTGCCTCGACCCGCGCGACGGCGAATCCCTCTACCTGACCCTGCGCGAACCCGGCAGCCG CCGCGACAGTGGCTTCTGGCTGTTGCACCTGGCCAGCGACAGCCTCGCCCAGTGGAGTCCCGACCTGCCCACCGGCAACCTGCTCTGGCGCCTGGAAGAC CAATACGCCGGGCGGGTGCTCTGGCATACCCCGGGGAGCACGGCGCTGCTCGACGACATGCAGACCCTCGGCGTGGAACCGCTGCGCAACAGCGACTGGC AGCTTCGCGGGCTCTACGACAGCACGCGAGTGCGGCTCGGCCTGCTGCCGGGAATCGGCGGCGAGCTGGCGATCTTCCTCCTGCTGGTCGGCGTCACCGT GTACATGCTGCTGCGCCTGCACCGCGAGCAGCAAGGCCTGCGCGCCATGACCCTGGCCTCGCAGCGCAGCCTGCGCCAGGCGGCCACGGCACTGGCGGCG ATCGACGAGCGGGTGCTGGTGACCCGCGCCGACGGCCGCCTCAGCTACCTCAATCCCCAGGCCGAACGCCTCTTCGGCATCAGTTCGGCCCAGGCCCGCC AGCATCATCTGCTGGGCCTGCTGCCAGACCTCGAGCCAGGCTGGCTGACGGACGCCGGTGGCGACGGCGAGACCCGTAGCGAGCTGCTGCCGCTGCGGGT GCGCGGCGAGCCGCGGACGTTCACCCTCAGCCGCCATCCGCTGGCCAGCTATCCGGCGCTCGCCGACCAGGCCTGGACCCTCCGCGAGCAGATACTCCAG GGCGGGCAGGTCTGGGTGTTGCGCGACGTCACCGAGGAACAGCACGCCCTCGGCGTCCTGGAGGAAACCCGGCGGCGCTACCAGGACATCTTCGAAGGGG TCGGCGTGGCCCTCTGCGTGCTCGACCTCTCCGCCCTGCGCCAGGCTCTTGTGGAGCAAGGCCTGGACAGCTGCGCCGCACTGCGCGCCTGGCTCGCCGG CGAACCCGGGCGGCAGCAGGCGCTGCTGGAGCGGATCCGCATCACCGAGATCAACGATGTCAGTCGCCGCCTGCTACAGATCGATTCCACCGAACAGGCC TGGCAGCGCTTGCTCGACCACGGCCCGCTACAACCGGACAGCCTGCGCCTGCAGGTGATCGAGGCGCTCATCGAGCGCCGGCCGGTACTCGAACTTGAAG CCACGCTGCGCTGCGGCAAGAGCACGCCGCGGCACCTGTGGTTGCAACTGCGCCTGCCGGAAAACCCCGGCGAATGGCATGCGGTGACCCTCAGCCTGTC CGACGTCACCAGTCGCAAGGAAGTCGAACTGTCGCTGATCGAGCGCGAGAAGTTCTGGTCGGACGCGGTCCAGGCGGTGCCCGATACCCTCTACATCCAC GACCTGCACGCGCGCCGGGTGATCTTCAGCAACCATCACCTGGGCCAGCAACTGGGCTACAACCAGGAAGAACTGGCGCGGATGGGCGAGAACTTCTGGG AAACCCTGCTGCACCCCGACGACCAGGAATACTACTGGCGCATCCGCAACCTGCAGCACGTGGTCGGCGACGGCCTGCTGCTCGACAGCCAGTTGCGCTG GCGCCACCGCGACGGCCGCTGGCACTGGTTCGACATCCGCGAGCAGGCCTTCAGCCGCGACCGCAGCGGTCGCGTGGCGCGCCTGATCGGCGTGGCCAAG GACATCACCTTCACCGTCGAGGCGAACAACGCGCTGCGCGAGAACGGCCGACGCTACCGCATGCTGGCGGAAAACATCAGCGACGTGATCTTCTCCACCG ACGCCGAACTCAACGCCAGCTACGTCAGCCCCTCGGTACAGCACGTGTTCGGCTACAGCCCGGAATGGGCGCTGCTCAACGGCCTCCATCAGACCGCCAC CAACCCGCGCCAGCTCGGCCGCCTGAACGGCCTGCTGCGCCGCGTGCGGCACGCCATCGGCGACCGCCAGAAGCTCGCCGAGCTGCGGGAAAACCCTGGC CAGCATCTGTTCGCCCTCGACTGCCTGCGCGCCGACGGACGCAAGATTCCCATCGAACTGCGGATCGTCCTGATGTGGGACGAGCACGACCGCTTCGAAG GCCTGCTCGGCATCGCCCGCGACATCAGCCAGCAGCGCCGCGCCGAACGCGAGCTGCGGATGGCGGCGACGGTATTCGAACACTCCACGGCGGCGATCAT GGTCACCGACCCGGCCGGCTACATCGTCCAGGTCAACGATTCCTTCTCGCGCCTGACCGGCTACAGCCCGGCCGACGTGCTCGACCAGCAGCCGCGCCTG CTCACCGCCGACCGCCAGGAAGCCAACCAGCTCAAGCACGTGCTCGCCAGCCTGCAGCACAGCGGCAGCTGGGAAGGCGAGATCCTGCAGAAGCGCAAGA CCGGCGAACTCTATCCGTCCTGGGTCGGCATCACCGCGGTGCGTGACGAGGAAGGCGACCTGGTCAGCTTCGTCTGCTTCTTCAGCGACATCAGCGAGCG CAAGGCCAGCGAGCGGCGCATCCACCGCCTGGCCTACTACGACGCCCTCACCCACCTGCCCAACCGCACGCTGTTCCAGGACCGTCTGCATACCGCCCTG CAGCAGGCCGAGCGCAACGGCCAGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCACGCCGCCGGCGACC GCATGCTGCAGGAAGTGGCGACCCGCCTGAGCGCCTGCGTCAGCCAGGACGATACCGTGGCGCGCATGGGCGGCGACGAATTCACCCTGCTGCTGCCTTC CCAGGGCGACCGCGAGATCGCCCTGAAACGGGCGATCCAGGTCGCCGAGCTGATCCTCGGCCGTCTGGCCCGGCCGTTCACCCTGGAAGGCCGTGAATTC TTCGTCACCGCCAGCATCGGCGTGGCCTTGTCGCCCCAGGACGGCACCGAACTGAGCCTGCTGATGAAGAACGCCGACACGGCGATGTACCACGCCAAGG AGATGGGCAAGAACAACTTCCAGTTCTACCAGGCCGAGATGAACGCTCGCGCCCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCGCGCCCTTGAACT GGGCGAGTTCGTCCTCCACTACCAGCCGCAGTTCACCGGCGACGGCCGCCGCCTGACTGGCGCCGAGGCCCTGCTGCGCTGGCAGCATCCGCGCCGCGGA CTGGTTCCGCCGAGCGAGTTCATTCCGGTGCTGGAGGAGATCGGCCTGGTGGCCCAGGTCGGCGACTGGCTGCTGGCGGAAGCCTGCAAGCAGTTGCGCA GCTGGCACAAGGCCAAGGTGCGGGTGCCGAAGGTCTCGGTGAACCTCTCGGCACGGCAGTTCGCCGATGGCCAGTTGGGCGAGCGGATCGCCGCGATCCT CTACGAGACAGGCATCCCGCCGGCCTGCCTGGAGCTGGAGCTGACCGAAAGCATCCTGATGAGTGACGTCGCCGAGGCCATGCAGATCCTCTCCGGGCTC AAGCGCCTCGGCCTGGCCATCGCGGTGGACGACTTCGGCACCGGCTACTCCTCGCTGAACTACCTCAAGCAGTTCCCCATCGACGTGTTGAAGATCGACC GCAGCTTCGTCGACGGCCTGCCCCACGGCGAACAGGACGCACAGATCGCCCGGGCGATCATTGCCATGGCCCACAGCCTGAACCTGATGGTGATCGCCGA GGGCGTGGAGAGCCAGGCCCAGCTGGACTTCCTTCGCGAGCACGGCTGCGACGAGGTGCAAGGCTACCTGTTCGGCCGGCCGATGCCCGCCGAGCAGTTC GGCATGCTCTACGCCAGCGACGTGCTGTTCATGTTCAACGAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCGTGCGGCGCGCTTGAGCGCCGCTTATCCGCGACATGATGGCCTTTCATGTGCCAGCACCCGCCGCATGGGTTAGAATGCGCGCCTTTTCCCAGC ACCGATCCTTATGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTGCCGCGATGGAGCAGGAAGCCCAGCGCCAG GAAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGTTCGGTGCTGACCAACAAGTACGCCGAAGGTTATC CGCACAAGCGCTACTACGGCGGCTGCGAGTACGTCGATATCGTCGAGCAACTGGCCATCGACCGCGCCAAGCAACTGTTCGGCGCCGATTACGCCAACGT CCAGCCGCACGCCGGCTCCCAGGCCAACGCCGCGGTCTACCTGGCCCTGCTGTCGGCCGGCGACACCATCCTCGGCATGAGCCTGGCCCATGGCGGCCAC
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Amino Acid Sequence |
>motility regulator
MSTPSLTPSPPPAGDPLTVPDRPAAKAGLLLLVLLMLGLLLWQMSQELRQQERFEHERAAAQLDRLNDRLSLTLELKARTALALLPGVPPSERGEIQGRL LPRISDALPQVRQLQWVDSAPQTDSPSPETTLPEQLRQHAGSGLYHYCLDPRDGESLYLTLREPGSRRDSGFWLLHLASDSLAQWSPDLPTGNLLWRLED QYAGRVLWHTPGSTALLDDMQTLGVEPLRNSDWQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLRQAATALAA IDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQ GGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALVEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQIDSTEQA WQRLLDHGPLQPDSLRLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIH DLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAK DITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPG QHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRL LTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTAL QQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREF FVTASIGVALSPQDGTELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRG LVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGL KRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF GMLYASDVLFMFNEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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