Strain | Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCATGAGGCAGACGCCCTGAAACGCCTGTAGCGAGTTTTTCGGCAAGGAATGCCGCATGACCCCGCACGATTCTGCGAAGGCATGCCCGCGACAGACGA GCCCTTCCGGCCCATGTCTCCAAAAGAGCGTGGATCGAAGGTATTTCACTACTTCACGAGAGTGTGGCGAGCAATGAAGAGTTTTGCGTCGGTAAGTGCG CCATTAGCGCTTGAAACAGCCCCCCGCAGACGCGACCGCAGCGGATACCTCATGACCAGAGCCTGACGGCCCGTTCCGTCGCGAATGTGCTTGCACGACC GGATGCCCGCATGGGCCAGCCAGGCTGCCAGATCGCCAGCCCCGCGCCCGGCATCCATAGGCGATGACGCCCGGCGTCCCGCCGTTGTTGCGAAGAATCG GACATGACGGCTCCCTCCGCCGCTGCCTGCCGGCCCGTACCGGCCTCGGCCCCGCCCCGTCTGTCGTCAATTTGGTGCTGAAGATTTTGGAGAAGCGTTA
|
|
DNA Sequence for Gene |
>Q060_02374
ATGGCGCAAAACGATCACGAAACAGTCGACATGCTGCTGGTAGGCGCCGGCATCATGAGCGCGACCCTGGCGGTCCTGCTCAAGGAACTCGACCCCAACC TGAAGATGGAAGTCGTCGAACTCCAGGAGTCCGGCGCGATCGAAAGCTCCAACCCGTGGAACAACGCGGGCACCGGCCACGCCGGCCTGTGCGAGCTGAA CTACACCCCGCAGTCGGCCGACGGCAGCATCGACATCAAGAAAGCCGTGGGCATCAACACCATGTTCGAGGTGTCGAAGCAGTTCTGGTCGCACCTGGTC GCCAAGGGCACCTTCGGCTCGCCGAAGACCTTCATCAACCCGGTACCGCACCTGAGCTTCGTGCGCGGCAGCGAAGGCATCGCCTACCTGAAGAAGCGCT TCGAATCGCTGACGAAGCACCACGCTTTCGAGACCATGGTCTACTCCGAGGACAAGACCACCCTCGCCGAGTGGATGCCGCTGATGATGCCGGGTCGTCC GGCCGACGAAGCGATCGCCGCGACCCGCGTCGAGGGCGGTACCGACGTCAACTTCGGCGCCCTGACCAACCAGCTCCTGCAACACCTGGCGCAACAGCCG GGCGCGCAGATCCGCTACAACCAGAAGGTCACCCACCTGCGCCGCGCCGATAACGGCTGGCGGGTCACCGTCAAGGACACACGCAACGGCGGCGACCGCG AGATCCAGGCACGCTTCGTCTTCCTCGGCGCCGGCGGCGGCGCCCTGCCGCTCCTGCAACTTTCCGGCATCCCGGAAGGCAAGGGCTTCGGTGGTTTCCC GGTGAGCGGCCAGTGGCTGCGCTGCGACAACCCGGAAATCGTCAAGCAGCACCAGGCCAAGGTCTACAGCCAGGCCGAGGTCGGCTCGCCGCCGATGTCC GTGCCGCACCTGGACACCCGTGTGGTGGACGGCAAGAAATCCCTGCTGTTCGGCCCCTATGCCGGTTTCTCCACCAAGTTCCTGCGCCATGGCTCGTTCC TCGACCTGCCGCTGTCGGTACGCCCGGGCAACATCCTGCCGATGCTCTCGGTGGCCCGCGACAACATGGACCTGACCCGCTACCTGATCGGCCAGGTCAT GCAGTCGCCGGAACAGCGCCTGGAAGCCCTGCGCAAGTTCTACCCCGAAGCCAGGGCCGAGGACTGGCGCCTGGAAGTCGCCGGCCAGCGCGTGCAGATC ATCAAGAAGGATCCGAAGAAAGGCGGCATCCTGCAGTTCGGCACCGAGCTGGTGGCCGCCCACGACGGCTCCATCGCCGCCCTGCTGGGCGCCTCGCCGG GCGCCTCGGTGACCGTCTCGATCATGCTCGGCCTGATCGAGCGCTGCTTCCCGGAGCAGGCCCGTTCGCCGGAGTGGAGCGCCAAGCTGAAGGAAATCTT CCCGGCTCGCGAGAAAGAGCTGGAAAGCGACGCCGAGCTGTACCGCAGCGTCAGCAGCCGTTGCAGCGAGGTGCTGGAACTGACCGCGAAGAACGACGTG CAGGCCCCGGTCAACGCCGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGCGCGACGGAACAAGCCGCCTTCGGGCGGCTTGTTCATTTGTGGAGTCAGGCGCCGGCCTCGCAATTGATCATCCAGGACACCCCGAAACGGTCCAC CAGGGTACCGAAACAGGGCGACCAGAAGGTCTTGCCCAACTCCAGCTCGACCCACCCGCCGTCCTCCAGCAAGGCGTCATAGCAGCGCCGCGCCTGCTGC GGGTCGCGGGTATTCAGTGAAAGGGAAATCCCGGAGATCGGCTGCAACGCCGGCCCGTGCCCGTCCGAGGCCATGATCTGGCTGTCGCCGATCTGCAGGT TGGCGTGCATCACCTTGTCGCACCAGCCTTCCGGCACCACCACCGGACCGGGCGCCTCGTCGAAACGGAACAGGAAACTCACCCTGGCACCGATGGCGTG TTCATAGAAACGCAGGGCCTCTTCGCAACGGCCGTTGAAGCAGACGTAGGGCTGGACGTACATGGGAACCTCGGCAGGCTGTTTTTCCTGTGAGTGTAGA
|
|
Amino Acid Sequence |
>malate:quinone oxidoreductase
MAQNDHETVDMLLVGAGIMSATLAVLLKELDPNLKMEVVELQESGAIESSNPWNNAGTGHAGLCELNYTPQSADGSIDIKKAVGINTMFEVSKQFWSHLV AKGTFGSPKTFINPVPHLSFVRGSEGIAYLKKRFESLTKHHAFETMVYSEDKTTLAEWMPLMMPGRPADEAIAATRVEGGTDVNFGALTNQLLQHLAQQP GAQIRYNQKVTHLRRADNGWRVTVKDTRNGGDREIQARFVFLGAGGGALPLLQLSGIPEGKGFGGFPVSGQWLRCDNPEIVKQHQAKVYSQAEVGSPPMS VPHLDTRVVDGKKSLLFGPYAGFSTKFLRHGSFLDLPLSVRPGNILPMLSVARDNMDLTRYLIGQVMQSPEQRLEALRKFYPEARAEDWRLEVAGQRVQI IKKDPKKGGILQFGTELVAAHDGSIAALLGASPGASVTVSIMLGLIERCFPEQARSPEWSAKLKEIFPAREKELESDAELYRSVSSRCSEVLELTAKNDV QAPVNAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|