Strain | Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGCCCTGGGCGGCGAGCCGCTGGTGGTGGCCGTGCCCAACGGCGATCCGCTGGCGCGGCAAGAGCGGATCGGCCTGTACGATCTGCGTGATCGGCCG CTGATCCTGTTTCCGCTGGACTACGGCTCCGGCCTCAACGAACTGATCGAGCGCCTCTACCGGAAGGCCGGGCTGGCGCTGACGAGGGGACCGGCCGGAC GCCAGATCACCTCGATCATCGCCCTGGTCGCGGCCGGCCAGGGCGTTGCCCTGGTGCCGCGTTGCAGCACCGCGCTGGCCCGGGCCGGAGTCGTCTATCG CCCGCTGGCCGAGCCCGAGGCGCTGGCCGATTTCCTCGTCTTCACCCGCTGCCATGGCCGCAGCGCCGCGGTGGAGGCGTTTCTCGCCATCCTCGGCGGC CTGGACGCAGGCGAAACACCCCGACACATTTAGTCGCGCGGGTTCGCAAGCGAGATTTCTTATCATTCGTGCCTACGTTCCGCTGACGAGGCTGTTCTTC
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DNA Sequence for Gene |
>Q062_05596
ATGCAGGCAAGCAAAGCTCTACTCGCCGCCCTGGCTCTGGGCATCACCGGCCTGGCCCAGGCCGCCGACGAAGTGGTGGTGTATTCCTCGCGCATCGACG AGCTGATCAAGCCGGTGTTCGATGCCTACACCAGCAAGACCGGCGTGAAGGTCAAGTTCATCACCGACAAGGAAGCGCCGCTGATGGCGCGGATCAAGGC CGAAGGCGCGAACACCCCGGCCGACCTGCTGCTCACCGTGGACGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCCTGCTGCAACCGTTCAAGTCGGCC ACCATCGAACGGAACATTCCCTCGCAGTATCGTTCCAGCACCGATAGCTGGACCGGACTGTCGCTGCGCGCGCGGACCATCGTCTACTCCACCGAGCGGG TCAAGCCGGAAGAGCTGAGCACCTACGAAGCCCTGGCCGACAAGCAATGGGAAGGCCGCCTGTGCCTGCGCACGGCGAAGAAGGTCTACAACCAGTCGCT GACCGGGACCCTGATCGAGACCCACGGGGCGCAGAAGACCGAGGAAATCCTCCAGGGCTGGGTGAACAACCTGGCCACCGACGTATTCGCCGACGACAAC GCGGTGATCCAGGCGGTGGACGCCGGCCAGTGCGACGTCGGCATCGTCAATACCTACTACTACGGACGCCTGCACAAGCAGAACCCGAACCTGCGGGTCA AGCTGTTCTGGCCGAACCAGGCCGACCGCGGCGTCCACGTCAACCTGTCGGGCATCGGCCTGACTCGCCACGCGCCGCATCCCGAGGCAGCCAAGGCGCT GGTGGAATGGATGACCGGGCCCGACGCCCAGGCGCTGTTCGCCGGGATCAACCAGGAATTCCCGGCCAACCCGCAGGTCGCGCCGTCAGCCGAAGTCGCC AGCTGGGGCAGCTTCAAGGCCGACAGCATCCCGGTGGAAGTCGCCGGCAAGCGCCAGGCCGAGGCGATTCGCCTGATGGACCGCGCCGGCTGGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCGGTTATACTCGGCGCCCCGGCTCGTCCGAGCGGGGCGTCGTTCGTTCCGCACCGAGGATTTCGTGGCCCATCCCGCTCCCCGCCGCTGGTACCCC ATCACCTTCACCGTTGCCGCGCTGGTGCTGCTGCCGCTCAGCGTGCTGCTGCTGAGCTGGCTGGAGATCGACCGGGAAATCTGGAGCCACCTGTGGGATA CCCAGTTGCCGCGCCTGCTCGGCAACACCCTGACCCTGGTGCTCGGCGTCGGCATCGGCGTGACTCTGCTCGGGGTCAGCCTGGCCTGGCTCACCAGTCT CTGCGAATTCCCCGGGCGGCGCTGGCTGGACTGGGCGCTGATGTTGCCGTTCGCGATCCCGGCCTACGTCCTGGCGTTCGTCTTCGTCGGCCTGCTGGAT TTCGCCGGACCGGTGCAGAGCCTGCTGCGCGAGTGGTTCGGCAGCGGCCTGCGGTTGCCGCGCGTACGCTCCACCGGCGGGGTGATCCTGGTACTGGTGC
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Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MQASKALLAALALGITGLAQAADEVVVYSSRIDELIKPVFDAYTSKTGVKVKFITDKEAPLMARIKAEGANTPADLLLTVDAGNLWQAEQMGLLQPFKSA TIERNIPSQYRSSTDSWTGLSLRARTIVYSTERVKPEELSTYEALADKQWEGRLCLRTAKKVYNQSLTGTLIETHGAQKTEEILQGWVNNLATDVFADDN AVIQAVDAGQCDVGIVNTYYYGRLHKQNPNLRVKLFWPNQADRGVHVNLSGIGLTRHAPHPEAAKALVEWMTGPDAQALFAGINQEFPANPQVAPSAEVA SWGSFKADSIPVEVAGKRQAEAIRLMDRAGWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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