Pseudomonas aeruginosa BL08, Q062_05231

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2300:FF:000001 DNA-binding response regulator PhoB - - 36 115 5.8E-26
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 180 255 4.9E-24
FunFam G3DSA:1.10.10.10:FF:000005 Two-component system response regulator - - 156 257 2.2E-38
NCBIfam TIGR01387 JCVI: heavy metal response regulator transcription factor IPR006291 Transcriptional regulatory protein CusR-like, heavy metal response 39 254 4.9E-104
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 167 254 7.95428E-34
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 39 147 7.9E-25
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 155 258 8.5E-30
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 37 147 1.3E-39
Gene3D G3DSA:6.10.250.690 - - - 116 154 1.4E-18
CDD cd19935 REC_OmpR_CusR-like - - 39 137 6.63878E-58
Gene3D G3DSA:3.40.50.2300 - - - 34 115 4.1E-18
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 36 214 3.62E-40
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 37 253 9.4E-59
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 180 254 1.1E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.