Strain | Pseudomonas aeruginosa BL09 genomic scaffold adgge-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGGCCTGATGCAACCCTGGCGCTTCATCCGTATCACCGAGCCGGCGTTGCGCCGGGCCATCCACGGGCTGGTCGAGGACGAACGCGGACGCACCGCCG AAGCCCTCGGCGAGCGCTCCGACGAGTTCATGCGGCTCAAGGTAGAGGGCGTGCTGGATTGCGCCGAACTGCTGGTCGCCGCTCTGATGGACGACCGCGA GCGCCATGTGTTCGGTCGCCGGACCCTGCCGCAGATGGACCTGGCGTCGCTCGCCTGCGCGATCCAGAACCTCTGGCTGGCCAGTCGCGCCGAGGGCCTG GGGATGGGCTGGGTATCGTTGTTCGATCCGGCCGCGCTGGGCGAGTTGCTCGGCCTGCCGCCCGGCAGCGAGGCGGTGGCGGTGCTCTGCCTGGGCCCGG TGGCGGAGTTCTACCCGGCGCCGATGCTGGCGCTGGAGGGTTGGAGCGAACCGCGTCCGCTGGCCGAGCTGGTCTACCAGAACCGTTGGGGCGAGCGAGC
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DNA Sequence for Gene |
>Q063_04344
ATGAGCGCACTGCTGGGTATCCTCGGCGTGGCGCTGGATGCGCGCTTCGGCGAGCCGCAGGGCTGGCACCCGCTGGTCGCCTTCGGCCGCCTGGCCGATC GCCTGGAGCGCCGTTTCAATCGCTCGCGCCTGGCCGGCGAGGGCGATCCCGGGGTCGGCTGGCGCAGCCACGGGGTGACCGCTTGGGTCCTCGCGGTACT GCCGCTGACCCTGCTGGCCTGGGCGCTCGCTGAACTTTCCTACCTCGGCTGGCTGGTCCAGGCCCTGGCGCTGTACGCCGCGCTCGGCCTGCGCAGCCTC GGCGAGCACGCCGAACCGGTGGCGCTGGCCTTGCGCGCCGGCGACCTGGACGAGGCGCGGCGACGTGTCGGCTACCTGGTCAGCCGCGATACCCGCGAGC TGGACCAGGCCGGGGTCGCCCGCGCGGCCACCGAATCGGTACTGGAGAACGGCAGCGACGCGGTCTACGCCGCGCTGTTCTGGTTCGCCGTGGCCGGCGC GCCGGGGGTGGTGCTGTATCGCCTGAGCAATACCCTGGACGCGATGTGGGGCTACCGCAACGCGCGCTTCGAGCGCTTCGGCTGGGCTGCGGCGAAGATC GATGACATCCTCAACTACCTGCCGGCGCGGCTGGTGGCGCTGACCTACGCGCTGCTCGGCGGCACCCGCCAGGCCCTGCGCTGCTGGCGCGAGCAGGCGC CGCAATGGGACAGCCCCAACGCCGGCCCGGTGATGGCCGCCGGCGCCGGTGCGCTGGGGGTTTCCCTGGGCGGCGCGGCGATCTACCACGGCGAGCTGCA CCAGCGGCCGCTCCTCGGCAGCGGCCCGCAGCCGCAGGGCCGCGACATCTATCGGGCCCTGGCGCTGGTGCGCCAGGGCGTGCTGCTCTGGCTGCTGGTG CTGGCCGGACTCTGGGCCATGGGGTGGCTGCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCACGGAGGGCGGTTGCGCGAGGCGGCGCGCCGCTACGACATTCCGCTGGCGGACTGGCTGGACCTGTCCACCGGCATCGCGCCCTGGCCGTTTCCGCTG CCGGCGATCCCCGAGCAGGCCTGGACCCGCCTGCCGGAGAGCGACGACGGCCTAGAAGCCGCCGCCTGCCTCTACTACGGCGCCGAACGGGTATTGCCGC TGGCCGGCAGCCAGGCGGCGATCCAGGCCCTGCCAAGGTTGCGGCGGGGCGGGCGGGTCGGCGTCCTGTCGCCGTGCTATGCCGAGCACGCCCACGCCTG GCGCCAGGCCGGGCACCTGGTGCGGGAGGTCGGCGAGGCCGAGGTCGAGCCCTATCTCGACAGCCTCGACGTGCTGCTGGTGGTCAACCCGAACAACCCC ACCGGGCGGGTCTTCGAGCCCGCCGAGCTGCTGGCCTGGCATGCCCGCCTGCAACGTCGCGGCGGCTGGCTGCTGGTCGACGAGGCGTTCATGGACTGTA
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Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSALLGILGVALDARFGEPQGWHPLVAFGRLADRLERRFNRSRLAGEGDPGVGWRSHGVTAWVLAVLPLTLLAWALAELSYLGWLVQALALYAALGLRSL GEHAEPVALALRAGDLDEARRRVGYLVSRDTRELDQAGVARAATESVLENGSDAVYAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAAKI DDILNYLPARLVALTYALLGGTRQALRCWREQAPQWDSPNAGPVMAAGAGALGVSLGGAAIYHGELHQRPLLGSGPQPQGRDIYRALALVRQGVLLWLLV LAGLWAMGWLHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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