Strain | Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACGACATCCTCCAGGGTGGGCTTGCCCTCACCAGCGGCAACTACCAGCTCAACTACCAGGGCAACCTGCTGAGCATCCTGCCGCTGCCGGTCACGCCGG GCGACCTGGGGCAACTGGCAGCGCTCTCCGACTTGCGCGAACTGCAGAAGGGGCGCGATCCGGATACCCCCGGGGATGCGGTCTACCGCACCACCACGCT GGAAAACCCGTTCCTCGAAAACCCGTTCCTGCGCGCCTACGCTCTGGGTATGGACGTCAGCGATCCGAACCTGCTGCCGGCTACCGCCGCGGGGCCGGCA GAGGACGCCAGCGCCAAGCGGGTGGGGCAGTTCACCGATCGTCCGCTCAGGGCAGAGGCCGAGAGTGGGGCGGGTTGCTCGAACCAGAGCTACCTGGCCG ACTACTGGAGCTGCTTCAACAAGCCTCTGAATTTCTAACCCTTTTCGCAATGCGCACTATCGTCTCCGGGCGGTAGTGCGTCATCTGCCCGAGGTGAATG
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DNA Sequence for Gene |
>Q070_05894
ATGAAACCTTCGCAATGGACGCTTCGCTGGGTGACGCTCTGTGGCTGCGGGATGCTGGCAGCTTCCGCCGCCGCCGTGGAGTTGCCAGGGACTGTACAGC CATCCCAGCTCGATGAACGCTTCAAGCCCCGCAGCGAGCCGCAGGCCAAGCCCGAGGCGCCGCTGGTGGTGCCCAAGCAGGTCGCGCCGCAAGGCAGCGA ACAGATCCGCTTCGAACTGCGCGAGATACGCATCGAAGGCAACACCCGCTATGACAAGGCGGTGCTCGAGTCCTATTACCAGCATATGCTCGGCAAGCAG GTGTCCCTGGCCGAACTGGTCGACCTGGCCAACCGCCTCACCGCCAAGTACCGCCAGGACGGCTATCTGTTGACCCAGGTAGTGGTGCCGGAGCAGAGCA TCGAGGGCGGCAAGGTACGCCTGCAGGTGATCGAGGGTTACCTCGAACACGTGCAGATCAAGGGAACCGTCGATGGGCCGCGGGTGCGGGTGGAGGAACT GCTCGCGCCGCTGACCGAAAAACGTCCGCTGGATGCCGATACCCTGGAGCGCGGCCTGCTGCTGGTCGGCGACCTGCCGGGGGTCAACGTGCAGAGCGTG CTCAGCCCGGGGCAGGCGCTGGGCTCGTCGAACCTCGACGTGGCCTTGCAGCAGCAGCGATACGAAGGCTTCGTCAGCCTCGACAACCGCGGTTCGCACT ACACCGACCCGACCACCCTGGCCTTCGGTGCCACCGAGTTCTCCCGCCTGGGCTTCTACGAGCAGATCGACGTGCTCGGCGCGATCTCGCCGTTCAGCGA TGCCACCCGCTACATCCAGTTGCGCGGCACGTTGCCGCTGGGCGGCATGTTCGCCGGCGATACCCTGCAGATCATGGGTTCCTATTCGAAGGTCAACCCG GACATCCCGGACTCGGTATTCCCCTTCGACAGCGTCAGCAAGAGCACCGAAGGCAGCATTTCCTACAACCATCCCTTCATCCGCTCGCGCTCGCAGAACC TGAGCGGCGGCCTGGCGTTGCAGTGGAAGGATACCGAGACCCGCCTGCGCGACTTCGCCAGCGACGCCTCGAACCCCGGTCGTGACCATGTGCGGGTGTT CCAGCAACGCCTGACCTATGACTGGGTCGATCGCTGGATGGGCATCAACCTGGCGGAGGTGCGCAACAACATCGGCCTGGACATGTGGGGCGCGACCAAG AAGGACGATGAACGTCGTTCCCGCGAAGTGGCCGACGGACGTTTCGTCTATCTCAACGGCAACGTCGGGCGCCTGCAAGGGCTCGGCGGACCCTGGTCGG TGTATGGCGAGTTGCAATGGCAGTACAGCTTCGACCCGCTGCTGCCGAGCGAGCGCTTCGGCGTCGGCGGCAGCGGGATCGGTCGCGGCTTCGCCCCGGG CAACATCACCGGTGACCGTGGCTTCGCCCTGAAGCTCGAACCGCGCTATGGCCAGGCGGTGGGCTACAGCTGGCTGCGCAGCTACCAGGCCTACGCTTTC TACGACTGGGGCAAGACCTACAACCTCGACGTGGACGATGACGAGCAGCAGAAGCTCGGCTCGATCGGTGCCGGGGTGCGCTTCAACCTCACCGACCAGT TGTCGTTCAACCCGGAGATTGCCCGCCAGGTCATCGGCGAGCCAGCCGACCAGCGCGATGGGAAGCGCGAGACGCGGGTCCTGTTCAACGTGGTGGCGCG CTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCTGCCGGCCTCCGTTCCGGAGGCTGCTGACGGAGCCCCTCTCCGGTTCTGCGGAGAGGGAGGTCCGTGCTCAATTCCGAGTGTTTTTCTCAAACTTT CGATTTCTTCGATTCTTCATATCGATGCCGTCAATCCGTGTCGAGGTCGGTCGGAGAGGCGTATTCTTGCTGTAACTGCTGTGCTAGAGCGGTTATTCGC ACTATTTCAAACGTCGATGAATACTATTGGCGCGCTTCGTTTTCCAATCGAGTTTCCCGAACAGAGAATGGCCCCACGTGACGAATACCTGGAGCCACTG CCATGAAACGCCCGCTGATCCTCGCCATCGCCCTTGCTACCCTGACCGCCAATGCCGCCTTCGCCGCACCGCGGGTCGAATCCATCGCCCTGCGCGGTGC CCAACAACTGATCGCCTCCGACGGTTCCGACCGTACCCTCGAGCGCCTGCGCAAGACCCAGGCGCCGCGCGTCCAGGAAGAACGCCGGGTCGCCGAAAGC
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Amino Acid Sequence |
>hemolysin activation/secretion protein
MKPSQWTLRWVTLCGCGMLAASAAAVELPGTVQPSQLDERFKPRSEPQAKPEAPLVVPKQVAPQGSEQIRFELREIRIEGNTRYDKAVLESYYQHMLGKQ VSLAELVDLANRLTAKYRQDGYLLTQVVVPEQSIEGGKVRLQVIEGYLEHVQIKGTVDGPRVRVEELLAPLTEKRPLDADTLERGLLLVGDLPGVNVQSV LSPGQALGSSNLDVALQQQRYEGFVSLDNRGSHYTDPTTLAFGATEFSRLGFYEQIDVLGAISPFSDATRYIQLRGTLPLGGMFAGDTLQIMGSYSKVNP DIPDSVFPFDSVSKSTEGSISYNHPFIRSRSQNLSGGLALQWKDTETRLRDFASDASNPGRDHVRVFQQRLTYDWVDRWMGINLAEVRNNIGLDMWGATK KDDERRSREVADGRFVYLNGNVGRLQGLGGPWSVYGELQWQYSFDPLLPSERFGVGGSGIGRGFAPGNITGDRGFALKLEPRYGQAVGYSWLRSYQAYAF YDWGKTYNLDVDDDEQQKLGSIGAGVRFNLTDQLSFNPEIARQVIGEPADQRDGKRETRVLFNVVARF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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