Strain | Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGACTTCCTCGACCCGCACGGCGAAGGCGCACGCTGGCAGTCCTACCTGGAAGCGCTGGACGCCTTCTTCCTGCGCGGACAGCAGAAAGGCGTGTTTCG CATCGACATCACGGCAGCCGTGTTCACCGAACTGTTCATCACCCTGGTCTACGGCATGGTCGATGCGGAACGTCGCGGACGGGCGGCCAGCTCCAATTCC GCGCATACCCTGGAGCAGATGTTCCTCCACGGCGCCTCCAATCCGGCGCGCTCCTGACCCTCACGCCCGCGGCGGCGCCCCTCTCGTCGCCGCATGGCAC GGTCCGATCCGCATGCCGTCGACTTCGGCCGCCCGGAGGCCTGCTCGACACACGGGAAGATCAGTCGTCACGGGCCCTGCGACAAAGTGCCTCGACAGCC GGAAAGGACCGTGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATCCTAACTGTCTACCGAATCACACCTCCCCCAGGAATTCCGGTCA
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DNA Sequence for Gene |
>Q070_05870
GTGTCGACCCCCTCGCTAACCCCGTCGCCGCCTCCCGCCGGCGACCCACTGACCGTACCCGACCGACCGGCAGCCAAGGCTGGCCTGCTGTTGCTGGTCC TGTTGATGCTCGGCCTGCTGCTCTGGCAGATGAGCCAGGAGCTGCGCCAGCAGGAACGCTTCGAACACGAGCGGGCCGCGGCCCAGCTCGATCGTCTCAA CGACCGCCTGTCCCTGACCCTCGAACTCAAGGCGCGCACCGCCCTCGCCCTGCTCCCGGGCATGCCCCCCAGCGAGCGTGGCGAGATCCAGGGCAGGCTG TTGCCGCGCATCAGCGATGCGCTGCCGCAGGTTCGCCAGTTGCAATGGGTGGACAGCGCCCCGCAGACGGGCAGCCCGTCGCCGGAAACGACGCTGCCCG AGCAGTTGCGCCAGCACGCCGGCTCCGGCCTCTACCACTATTGCCTCGACCCGCGCGACGGCGAATCCCTCTACCTGACCCTGCGCGAACCCGGCAGCCG CCGCGACAGCGGCTTCTGGCTGTTGCACCTGGCCAGCGACAGCCTCGCCCAGTGGAGTCCCGACCTGCCCACCGGCAACCTGCTCTGGCGCCTGGAAGAC CAATACGCCGGACGGGTGCTCTGGCATACCCCAGGGAGTACGGCGCTGCTCGACGACATGCAGACCCTCGGCGTGGAACCGCTGCGCAACAGCGACTGGC AGCTTCGCGGGCTCTACGACAGCACCCGGGTGCGGCTCGGCCTGCTGCCGGGAATCGGCGGCGAGCTGGCGATCTTCCTCCTGCTGGTCGGCGTCACCGT GTACATGCTGCTGCGCCTGCACCGCGAGCAGCAAGGCCTGCGCGCCATGACCCTGGCCTCGCAGCGCAGCCTGCGCCAGGCGGCCACGGCACTGGCGGCG ATCGACGAGCGAGTGCTGGTGACCCGCGCCGACGGCCGCCTCAGCTACCTCAATCCCCAGGCCGAACGCCTCTTCGGCATCAGTTCGGCCCAGGCCCGCC AGCATCACCTGCTGGGCCTGCTGCCGGACCTCGAGCCAGGCTGGCTGACGGACGCCGGTGGCGACGGCGAGACCCGTAGCGAGCTGCTGCCGCTGCGGGT GCGCGGCGAGCCGCGGACGTTCACCCTCAGCCGCCATCCGCTGGCCAGCTATCCGGCGCTCGCCGACCAGGCCTGGACCCTCCGCGAGCAGATCCTCCAG GGCGGGCAGGTCTGGGTGTTGCGCGACGTCACCGAGGAACAGCACGCCCTCGGCGTCCTGGAGGAAACCCGGCGGCGCTACCAGGACATCTTCGAAGGGG TCGGCGTGGCCCTCTGCGTGCTCGACCTCTCCGCCCTGCGCCAGGCTCTGGTGGAACAAGGCCTGGACAGCTGCGCCGCACTGCGCGCCTGGCTCGCCGG CGAACCCGGGCGGCAGCAGGCGCTGCTGGAGCGGATCCGCATCACCGAGATCAACGATGTCAGTCGCCGCCTGCTGCAGATCGAGTCCACCGAACAGGCC TGGCAGCGCTTGCTCGACCACGGCCCGCTACAACCGGACAGCCTGCGCCTGCAGGTGATCGAGGCGCTCATCGAACGCCGGCCGGTACTCGAACTGGAAG CCACGCTGCGCTGCGGCAAGAGCACGCCGCGGCACCTGTGGTTGCAACTGCGCCTGCCGGAAAACCCCGGCGAATGGCATGCGGTGACCCTCAGCCTGTC CGACGTCACCAGTCGCAAGGAAGTCGAACTGTCGCTGATCGAGCGCGAGAAGTTCTGGTCGGACGCGGTCCAGGCGGTGCCCGATACCCTCTACATCCAC GACCTGCACGCGCGCCGGGTGATCTTCAGCAACCATCACCTGGGCCAGCAACTGGGCTACAACCAGGAAGAACTGGCGCGGATGGGCGAGAACTTCTGGG AAACCCTGCTGCACCCCGACGACCAGGAATACTACTGGCGCATCCGCAACCTGCAGCACGTGGTCGGCGACGGCCTGCTGCTCGACAGCCAGCTGCGCTG GCGCCACCGCGACGGCCGCTGGCACTGGTTCGACATCCGCGAGCAGGCCTTCAGCCGCGACCGCAGCGGTCGCGTGGCGCGCCTGATCGGCGTGGCCAAG GACATCACCTTCACCGTCGAGGCGAACAACGCGCTGCGCGAGAACGGCCGACGCTACCGCATGCTGGCGGAAAACATCAGCGACGTGATCTTCTCCACCG ACGCCGAACTCAACGCCAGCTACGTCAGCCCCTCGGTACAGCACGTGTTCGGCTACAGCCCGGAATGGGCGCTGCTCAACGGCCTCCACCAGACCGCCAC CAACCCGCGCCAGCTCGGCCGCCTGAACGGCCTGCTGCGCCGCGTGCGGCACGCCATCGGCGACCGCCAGAAGCTCGCCGAGCTGCGGGAAAACCCTGGC CAGCATCTGTTCGCCCTCGACTGCCTGCGCGCCGACGGACGCAAGATTCCCATCGAACTGCGGATCGTCCTGATGTGGGACGAGCACGACCGCTTCGAAG GCCTGCTCGGCATCGCCCGCGACATCAGCCAGCAGCGCCGCGCCGAACGCGAGCTGCGGATGGCGGCGACGGTATTCGAACACTCCACGGCGGCGATCAT GGTCACCGACCCGGCCGGCTACATCGTCCAGGTCAACGATTCCTTCTCGCGCCTGACCGGCTACAGCCCGGCCGACGTGCTCGACCAGCAGCCGCGCCTG CTCACCGCCGACCGCCAGGAAGCCAACCAGCTCAAGCACGTGCTCGCCAGCCTGCAGCACAGCGGCAGCTGGGAAGGCGAGATCCTGCAGAAGCGCAAGA CCGGCGAACTCTATCCGTCCTGGGTCGGCATCACCGCGGTGCGCGACGAGGAAGGCGACCTGGTCAGCTTCGTCTGCTTCTTCAGCGACATCAGCGAGCG CAAGGCCAGCGAGCGGCGCATCCACCGCCTGGCCTACTACGACGCCCTCACCCACCTGCCCAACCGCACGCTGTTCCAGGACCGTCTGCATACCGCCCTG CAGCAGGCCGAACGCAACGGCCAGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCACGCCGCCGGCGACC GCATGCTGCAGGAAGTGGCGACCCGCCTGAGCGCCTGCGTCAGCCAGGACGATACCGTGGCGCGCATGGGTGGCGACGAATTCACCCTGCTGCTGCCTTC CCAGGGCGACCGCGAGATCGCCCTGAAGCGGGCGATCCAGGTCGCCGAACTGATCCTCGGCCGTCTGGCCCGGCCGTTCACCCTGGAAGGCCGTGAATTC TTCGTCACCGCCAGCATCGGCGTGGCCTTGTCGCCTCAGGACGGCGCCGAACTGAGCCTGCTGATGAAGAACGCCGACACGGCGATGTACCACGCCAAGG AGATGGGCAAGAACAACTTCCAGTTCTACCAGGCCGAGATGAACGCCCGCGCCCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCGCGCCCTGGAACT GGGCGAGTTCGTCCTCCACTACCAGCCGCAGTTCACCGGCGACGGCCGCCGCCTGACCGGCGCCGAGGCCCTGCTGCGCTGGCAGCATCCGCGCCGCGGA CTGGTTCCGCCGAGCGAGTTCATTCCGGTGCTGGAGGAGATCGGCCTGGTGGCCCAGGTCGGCGACTGGCTGCTGGCGGAAGCCTGCAAGCAGTTGCGCA GCTGGCACAAGGCCAAGGTGCGGGTGCCGAAGGTCTCGGTGAACCTCTCGGCGCGGCAATTCGCCGATGGCCAGTTGGGCGAGCGGATCGCCGCGATCCT CTACGAGACAGGCATCCCGCCGGCCTGCCTGGAGCTGGAACTGACCGAAAGCATCCTGATGAGCGACGTCGCCGAGGCCATGCAGATCCTCTCCGGGCTC AAGCGCCTCGGCCTGGCCATCGCGGTGGACGACTTCGGTACCGGCTACTCCTCGCTGAACTACCTCAAGCAGTTCCCCATCGACGTGCTGAAGATCGACC GCAGCTTCGTCGACGGCCTGCCCCACGGCGAACAGGACGCGCAGATCGCCCGGGCGATCATTGCCATGGCCCACAGCCTGAATCTGATGGTGATCGCCGA GGGCGTGGAGAGCCAGGCCCAGCTGGACTTCCTTCGCGAGCACGGCTGCGACGAGGTGCAAGGCTACCTGTTCGGCCGGCCGATGCCCGCCGAGCAGTTC GGCATGCTCTACGCCAGCGACGTGCTGTTCATGTTCAACGAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCGTGCGGCGCGCTTGAGCGCCGCTTGTCCGCGACATGATGGCCTTTCATGTGCCAGCACCCGCCGCATGGGTTAGAATGCGCGCCTTTTCCCAGC ACCGATCCTTATGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTGCCGCGATGGAGCAGGAAGCCCAGCGCCAG GAAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGTTCGGTGCTGACCAACAAGTACGCCGAAGGTTATC CGCACAAGCGCTACTACGGCGGCTGCGAGTACGTCGATATCGTCGAGCAACTGGCCATCGACCGCGCCAAGCAACTGTTCGGCGCCGATTACGCCAACGT CCAGCCGCACGCCGGCTCCCAGGCCAACGCCGCGGTCTACCTGGCCCTGCTGTCGGCCGGCGACACCATCCTCGGCATGAGCCTGGCCCACGGCGGCCAC
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Amino Acid Sequence |
>diguanylate cyclase
MSTPSLTPSPPPAGDPLTVPDRPAAKAGLLLLVLLMLGLLLWQMSQELRQQERFEHERAAAQLDRLNDRLSLTLELKARTALALLPGMPPSERGEIQGRL LPRISDALPQVRQLQWVDSAPQTGSPSPETTLPEQLRQHAGSGLYHYCLDPRDGESLYLTLREPGSRRDSGFWLLHLASDSLAQWSPDLPTGNLLWRLED QYAGRVLWHTPGSTALLDDMQTLGVEPLRNSDWQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLRQAATALAA IDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQ GGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALVEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQIESTEQA WQRLLDHGPLQPDSLRLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIH DLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAK DITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPG QHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRL LTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTAL QQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREF FVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRG LVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGL KRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF GMLYASDVLFMFNEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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