Pseudomonas aeruginosa BL18, Q072_05344
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL18 genomic scaffold adgey-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCAATTGGGCAATCGCGTCGCACCTTCCACTCCGGAGGGTATCCTCAGTGTCATCAAGGAAGTGAAGAAAGGCGGTTGCGTAGGGATTCCCGCCGACCC CGAGCCCGCGCGTACCGCTGGGCTCTTCGTGCCCTACCTGGGCACCACTGCATTGATCAGCAAGTTCGTCCCGCAGTTGCTTTCACGCGGCAAGGCGCGT GGAGTGTTCTTCCATGCGGTGCGCCTGCCCGATGGTAGCGGTTACAAGGTGATCCTCGAAGCGGCTCCGGCGGACATGTACGACAAGGACCTGGAAGTGT CTGTAGCAGCCATGAGCCGCGAGTTGGCGAAGTATGTACGAGCCTATCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAACCGCCCGGATGGCGA GAAAAAATGGTACTGAGGAAAGGGCGTCGGAAGACGCCTTTTTCATATCCGGGTACTATGCTCAGCTCTGCCGCCTCCTCCGCAGGTCCCGAGGGACTCG
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| DNA Sequence for Gene |
>Q072_05344
ATGGATAATCAACGACAATACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGTCACCCGTTATTTGGCGAGCTGATGGCGCAGACACGCGACCTCT CCGACACCGGGGTCTATGTCAAACACCCGGAGCTGACCCAGCTCCCAACAGGCAGTGTCGTTACTGGCCAGGTACAGGATCTGCCGATCGACGCGCCGAT CCTGCAGATGGAAGTCGTGCGAGTCGATGCGGAAGGCGTCGGCCTGCGCTTTCTCAGCGAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGTGATGTTCCACGTGGAACCCCAGGCATGAGCCACTGATCACAGAGTGGGCGAAACCGCTGCCGGTTATCGGCTAGAATGCGCGCCGCTCGGCATGG TGCCGGGCATGGGTTCCCTCACCCCATCGCGCAAAAAGGACAGTACATGTCAGCTTCTTCTCCGGCGGCCTGGCGCGGCACCCTGGCCGGCCTGATCGCC TTCCACATCTTCATCATCATCGCCAGCAACTACCTGGTGCAGTTGCCGATCACCCTGTTTGGCTGGCACACCACCTGGGGTGCCTTCAGCTTTCCGTTCA TCTTCCTGGCTACCGACCTCACCGTGCGCTTGCTGGGCAAGGGCCCTGCCCGGCTGGTCATCGCCCGGGTCATGATCCCGGCGTTGATCGCCTCCTACGT GGTCTCGGTGTTGTTCCAGGAAGCGGCGTTCCGTGGTTTCTCCGCGCTGCTGGAGTTCAACATCTTCGTCGCACGGATATCCCTGGCAAGCTTCCTCGCC
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| Amino Acid Sequence |
>pilus assembly protein PilZ
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPELTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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