Strain | Pseudomonas aeruginosa BL25 genomic scaffold adgfY-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCACGGCGCCGGTAGCGGCATCCAGCTCCAGGTCCCACTTCACGCCCTGCGGGTCGCGCAACTCGACCTGGTAGATGTAGCGGCCGTATTCCTCTTCCAG CTCGGTATCGTGGACGCTCGAGCCGGGATGCTTGGCGATGGCGTTCTTGTTCAGCTCTTCGAAGGACTTGATGGTCCCGGCGTCACGCAGCTTCAGCGCC TCGTCCGGGCCGAGGTCGCGGGCCTGGGCCAGGCCGGCAGTCAGGGCGATGGCGGTGGCGGCGAACAGGGCAGTCAGTTTCTTCATGGGAATCTCTCCGT GGGAATCAATCGTGTTGCTTTCGACGGTTTGCAGATTAACCGGGCGCTCTTAATTGAAGCTGAATTTGCCGCAAGGACATGGCCGGGGCGCGCCATAGGG TAACGGAAAGCCTCTGCGATGGGGCTCGCCGGCGTTCGAAAGCGCTTGGTCCTGCGACAACTCGTCCTATAATCGCCGGTCCGCAAGGGAGAAGACCAGC
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DNA Sequence for Gene |
>Q079_00789
ATGCCAGCCATCCAGATCAAGTCCCCCGCACTGACCCTCAAGGCCGGTCGCCGCGCCCTCGCCCGCATCCGCGAGCGCGGCCTGCAGCCGACCGACGTCG GCATCGTCCCCGGTGCCGCCGGCGGGCCAAAGGCGCTGGGCATCCAGGGACTGGACCTGGCGATCTTCGGCGAGTGGCTGCCGCGCGCCCCGCGCGAACG CTCGCTGATCGGCGCCTCCATCGGTTCCTGGCGCTTCGCCAGCGCCTGCCTGCCCGACGCCGTGGCCGGCCTCACCCGCCTCGGCGAGCTGTACACCCGG CAGCGTTTTCCCAAAGGCGTGAGCATCGCCGAAGTCTCGCGCAAGTGCGCGGCGATGCTCGACGACCTGCTCGCCGGCCAGGACGCGCGGATCCTCGACA ACCCGCTGTACCGCCTCAACGTGGTGGTGGTGAAGAGCCACGGGCGCCTCGCCCACGACCACAAGGCCAGCCTCGGCCTGGGGCTGTCCTCGGTGATCCG CGACAACCTGATCGGCCGCCGCCACCTGCACCGCCACTTCGAACGGGTGATCCTGCATGACGCCCGCCAGGCGCCGCCGCTGGCCACGCTGACCGACTTC CCGTCGCGCTACCTGCACCTGGACGGCGGCAACCTGCGCCAGGCGCTGCTCGCCTCCGGCTCGATCCCGATGGTCATGGAAGGCGTCCGCGACCTGCCTG GCGCCGGCCCCGGCACCTACCGCGACGGCGGCCTGCTCGACTACCATCTCGACCTGCCCTACGAGGACCGCGGCGTGGTGCTCTACCCGCACTTCACCGA CAAGGTGATCCCCGGCTGGTTCGACAAGGGCTTGCCCTGGCGCCGTGGCGACGCCGGGCGCCTGCAGGACGTGCTGCTGCTGGCGCCGTCGCGCGAGTAC CTGGCGCGCCTGCCGCACGCCAAGCTGCCGGACCGCAAGGACTTCACCCGCTACCTCGGCGACGACGACGGCCGCGAGCGCTACTGGCGCCAGGCGATGG CGGAAAGCCGCAGGCTCGGCGACGAATTCCTCGAACTGGTCGACGGCGGCCGGCTCGGCGAACGCCTGCAAGCGCTGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCACCGACGAGAAGGATCCTGCATGAAACTGGCCGTAGCGCTGATCCACGGCATCGGCGACCAGCCCGATAGCCGCGACGAGGACGGTCTGCACAG CTACGCCCGCGAACTGGTGGCGGCGCTGCGCCGACGTCTCGGCGCGGAAGCCGGCGAGGTGGCCTTCCAGAGCCTGTACTGGGCCAGCGTGCTGGACGCC CGCGAGCTGGACTACCTCAAGCGCATCGAGCGCGAGCCGCTGGGCTGGCGCTGGCTGCGCCGGGCGGTGACGCTGTTCCTCGGCGACGCCAGCGGCTACC GCAAGGTCAGCGCCGCCTACGACACCACCTACCAGCAGGTCCACCAGCACGTGCGCAGCGGGATCATGGCCCTGCGCGCGAAGGTCGGGCCGCAGACGCC GCTGGTGATCCTCGCCCACTCCCTGGGCGGGCACATCGTATCCAACTTCATCTGGGACCAGCAGAAACTCAACCGCACGCCGAGTTGCTCGATCGACCCC
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Amino Acid Sequence |
>hypothetical protein
MPAIQIKSPALTLKAGRRALARIRERGLQPTDVGIVPGAAGGPKALGIQGLDLAIFGEWLPRAPRERSLIGASIGSWRFASACLPDAVAGLTRLGELYTR QRFPKGVSIAEVSRKCAAMLDDLLAGQDARILDNPLYRLNVVVVKSHGRLAHDHKASLGLGLSSVIRDNLIGRRHLHRHFERVILHDARQAPPLATLTDF PSRYLHLDGGNLRQALLASGSIPMVMEGVRDLPGAGPGTYRDGGLLDYHLDLPYEDRGVVLYPHFTDKVIPGWFDKGLPWRRGDAGRLQDVLLLAPSREY LARLPHAKLPDRKDFTRYLGDDDGRERYWRQAMAESRRLGDEFLELVDGGRLGERLQALD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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