Strain | Pseudomonas aeruginosa C20 genomic scaffold adgfy-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGTCCGGCACCGCCTTGCGCATGGGCGAGGTGGTAGCCCAGGCGCTCGGCCGGGACCTCCAGGAAGTGGCGGTCTACGGACGCGAGGGGCAGACCGGCG CGCGGGCGCGGGAAACCATCGGCTTCGCCACCGTGCGCGCCGGCGACGTAGTGGGCGACCACACCGTGCTGTTCGCCGCCGAGGGCGAGCGCGTGGAGAT CACCCACAAGGCTTCCAGTCGCATGACCTTCGCCCGTGGCGCGGTGCGTGCGGCGCTGTGGCTGGAGGGCAAAGAGAATGGCCTGTACGACATGCAGGAT GTGCTCGGTCTACGCTGAGACGCTGCCGCACGTCGTCTTATTGGTGGACCGGAATGTCGCGATTCTGTAAACTACAGCTTTAGTGTGTCCACTAAAAGCA GCGCAGCATGAATCGAAAAAAAGCGGGATGACTCTTCACGGTGTCATCCCGCTTTTTTACACCTGCGCGACCAGTCAGGCTTGATTTACGGGAGGTCTTC
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DNA Sequence for Gene |
>Q085_05583
TTGACTAAGCCAGCCATACTTGCACTTGCCGACGGCAGCATTTTTCGCGGTGAAGCCATCGGTGCCGACGGCCAGACCGTTGGCGAGGTGGTGTTCAACA CCGCCATGACCGGCTACCAGGAAATCCTTACCGATCCTTCCTACGCCCAGCAGATCGTCACCCTGACCTACCCGCACATCGGCAATACCGGTACCACCCC GGAAGACGCCGAGGCCAACCGTGTCTGGGCCGCCGGCCTGATCATTCGCGACCTGCCGCTGATCGCCAGCAACTGGCGCAGCAAGCAGTCGCTGCCTGAC TACCTGAAAGCCAACGGCACCGTCGCCATCGCCGGCATCGATACCCGTCGCCTGACCCGCATCCTCCGCGAGAAGGGTTCGCAGAACGGCTGCATCCTGG CTGGTGCCGACGCTACCGAGGAACGCGCGCTGGAGCTGGCTCGCGCCTTCCCCGGCCTGAAGGGCATGGACCTGGCCAAGGAGGTCACCACCGCCGAGCG CTACGAGTGGCGCTCCAGCGTCTGGAACCTGGAAAGCGACAGTCACCCGGAGATCCCGGCCGGTGAACTGCCGTATCACGTGGTGGCCTACGACTACGGC GTCAAGCTGAACATCCTGCGCATGCTGGTGGCGCGCGGCTGCCGCCTGACCGTGGTGCCAGCGCAGACACCGGCCAGCGAAGTGCTGGCGCTGAACCCTG ACGGCATCTTCCTTTCCAACGGCCCCGGCGACCCCGAACCGTGCGACTACGCGATCCAGGCGATCCGCGAATTCCTCGATACCGAGATCCCGGTGTTCGG CATCTGCCTCGGCCATCAGTTGCTGGCCCTGGCCTCTGGCGCCAAGACCCTGAAGATGGGCCACGGCCACCACGGCGCCAACCACCCGGTGCAGGACCTG GACAGCGGCGTGGTGATGATCACCAGCCAGAACCACGGTTTCGCGGTCGACGAGAGCACCTTGCCGGACAACCTGCGAGCCACTCACAAGTCGCTGTTCG ACGGTACCCTGCAGGGTATCGAGCGCACCGACAAGGTCGCTTTCAGCTTCCAGGGCCACCCCGAGGCGAGCCCCGGTCCGCATGACGTCGCCCCGCTGTT CGACCGCTTCATCTCGGCGATGGCCGAGCGTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCAGAGCCATGCCGACCCTGGGGATAACCGATTTCTGGACCTACGTGCTGGGTGTGGTTTTCGTGATCCTGTTGCCCGGGCCGAACTCGTTGTTCGT CCTCGCGACTTCGGCCCAGCGTGGCGTGGCGACCGGCTACCGGGCCGCCTGCGGCGTGTTCCTCGGCGACGCGGTGCTGATGCTGCTGTCGGCCCTTGGC GTGGCGTCCCTGCTGAAGGCCGAGCCGATGCTGTTCATCGGCCTGAAGTACCTCGGTGCGGCCTACCTGTTCTATCTCGGCGTCGGCATGCTGCGGGGCG CCTGGCGCAAGCTGCGCAATCCCGAAGCGACGGCGGCGCAGGCCGAACAGGTGGATGTCCACCAGCCGTTCCGCAAGGCGCTGCTGCTCAGCCTGTCGAA TCCTAAGGCGATCCTGTTCTTCATCTCCTTCTTCATCCAGTTCGTCGATCCCGGCTATGCCTATCCGGGCCTGTCGTTCCTGGTGCTGGCGGTGATCCTG
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Amino Acid Sequence |
>carbamoyl phosphate synthase small subunit
MTKPAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTGTTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPD YLKANGTVAIAGIDTRRLTRILREKGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSVWNLESDSHPEIPAGELPYHVVAYDYG VKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNGPGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPVQDL DSGVVMITSQNHGFAVDESTLPDNLRATHKSLFDGTLQGIERTDKVAFSFQGHPEASPGPHDVAPLFDRFISAMAERR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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