Pseudomonas aeruginosa C41, Q088_05765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa C41 genomic scaffold adgfh-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGGGCCGACTACCTGGCGGAGCTGGCCAGCGCCGGCAAGTCGCGCGACCCCGACGAGTCGGTCGTCAAGCTGATGCTCTGAAGCGCCGGGCCGAGTGCC CCTTCGCGGCACACGGCATCCAGGCGATTTTTCCCCGCTGCCCCGAACGAGGGCACGTCATTTGCAACATTCGCCCCGCAGACTGCCAGGCCAGACATCC GGTCGGCGCGGTCGCCACGGCGAATGTCCTACCCTGCACGGCAGCAACGCTCTAGTCCGCAGGTCGGCCGCTCGCCGGGCCAGCCACGCCGGCCACCGAT GCTTCTGCCAGCTTGCACGCCAGCGGAAACTCGCGTAACCAAGACGGTGCAGCCCCTTGTCCGGGTTCCCTTCCCTGACGTGCGTCCGCCCCGCCCTGAA ACGTGCGGGTGGGCTGGTAGTCGAGCAGTAGCCGGCCGGACACCTGGTCCCCGGTTTCGTTGCGGTCCCCTGTTTCGCCTCGAACAATGGAGCGTTGCCG
DNA Sequence for Gene
>Q088_05765
ATGAGTCAGAAGAACAATAACGAGCTTCCCAAGCAAGCCGCGGAAAACACGCTGAACCTGAATCCGGTGATCGGCATCCGGGGCAAGGACCTGCTCACCT CCGCGCGCATGGTCCTGCTCCAGGCGGTGCGCCAGCCGCTGCACAGCGCCAGGCACGTGGCGCATTTCAGCCTGGAGCTGAAGAACGTCCTGCTCGGCCA GTCGGAGCTACGCCCAGGCGATGACGACCGACGCTTTTCCGATCCGGCCTGGAGCCAGAATCCGCTGTACAAGCGCTACATGCAGACCTACCTGGCCTGG CGCAAGGAGCTGCACAGCTGGATCAGCCACAGCGACCTGTCGCCGCAGGACATCAGTCGTGGCCAGTTCGTCATCAACCTGCTGACCGAGGCGATGTCGC CGACCAACAGCCTGAGCAACCCGGCGGCGGTCAAGCGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTGGACGGCCTCGGCCACCTGGCCAAGGACCTGGT GAACAACGGCGGGATGCCGAGCCAGGTGGACATGGACGCCTTCGAGGTGGGCAAGAACCTGGCCACCACCGAGGGCGCCGTGGTGTTCCGCAACGACGTG CTGGAACTGATCCAGTACCGGCCGATCACCGAGTCGGTGCACGAACGCCCGCTGCTGGTGGTGCCGCCGCAGATCAACAAGTTCTACGTCTTCGACCTGT CGCCGGACAAGAGCCTGGCGCGCTTCTGCCTGCGCAACGGCGTGCAGACCTTCATCGTCAGTTGGCGCAACCCGACCAAGTCGCAGCGCGAATGGGGCCT GACCACCTATATCGAGGCGCTCAAGGAGGCCATCGAGGTAGTCCTGTCGATCACCGGCAGCAAGGACCTCAACCTCCTCGGCGCCTGCTCCGGCGGGATC ACCACCGCGACCCTGGTCGGCCACTACGTGGCCAGCGGCGAGAAGAAGGTCAACGCCTTCACCCAACTGGTCAGCGTGCTCGACTTCGAACTGAATACCC AGGTCGCGCTGTTCGCCGACGAGAAGACTCTGGAGGCCGCCAAGCGTCGTTCCTACCAGTCCGGCGTGCTGGAGGGCAAGGACATGGCCAAGGTGTTCGC CTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTCGGCAACCAGCCGCCGGCGTTCGACATCCTCTACTGGAACAACGAC ACCACGCGCCTGCCCGCCGCGCTGCACGGCGAGTTCGTCGAACTGTTCAAGAGCAACCCGCTGAACCGCCCCGGCGCCCTGGAGGTCTCCGGCACGCCCA TCGACCTGAAGCAGGTGACTTGCGACTTCTACTGTGTCGCCGGTCTGAACGACCACATCACCCCCTGGGAGTCGTGCTACAAGTCGGCCAGGCTGCTGGG TGGCAAGTGCGAGTTCATCCTCTCCAACAGCGGTCACATCCAGAGCATCCTCAACCCACCGGGTAACCCCAAGGCACGCTTCATGACCAATCCGGAACTG CCCGCCGAGCCCAAGGCCTGGCTGGAACAGGCCGGCAAGCACGCCGACTCGTGGTGGTTGCACTGGCAGCAATGGCTGGCCGAACGCTCCGGCAAGACCC GCAAGGCGCCCGCCAACCTGGGCAACAAGACCTATCCGGCCGGCGAAGCCGCGCCCGGAACCTACGTGCATGAACGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAAGCGACCAGCCTGAAGAACAGCCGCAGGAGCGATCCGCGGCCTCCGCCGACGAAACCCCGCCAGCGCCTCCGGCGCGGCCCCGTGCCGCGCGGAAGCC GGCCAGGCCCCGTATCGCCGAGCCCGCGGCCGCGCCGCCGAGGACCCCGAGCATGCCCCAGCCCTTCGTCTTCCGGACCATCGACCTCGACGGCCAGACC ATCCGCACCGCAGTGCGGCCGGGCAAGGAAGGAAGCACTCCGCTGCTGATCTTCAACGGCATAGGCGCCAACCTGGAACTGGTGTTCCCCTTCGTCCAGG CGCTCGACCCGGAACTGGAGGTGATCGCCTTCGACGTTCCCGGCGTCGGCGGTTCCTCGACGCCCAGCGTGCCCTACCGCTTTCCCGGCCTGGCCAAGCT GGCGGCGCGGATGCTCGACTACCTGGACTACGGCCAGGTCAACGCGATCGGCGTGTCCTGGGGCGGCGCGCTGGCCCAGCAGTTCGCCCACGACTATCCG
Amino Acid Sequence
>poly(R)-hydroxyalkanoic acid synthase
MSQKNNNELPKQAAENTLNLNPVIGIRGKDLLTSARMVLLQAVRQPLHSARHVAHFSLELKNVLLGQSELRPGDDDRRFSDPAWSQNPLYKRYMQTYLAW RKELHSWISHSDLSPQDISRGQFVINLLTEAMSPTNSLSNPAAVKRFFETGGKSLLDGLGHLAKDLVNNGGMPSQVDMDAFEVGKNLATTEGAVVFRNDV LELIQYRPITESVHERPLLVVPPQINKFYVFDLSPDKSLARFCLRNGVQTFIVSWRNPTKSQREWGLTTYIEALKEAIEVVLSITGSKDLNLLGACSGGI TTATLVGHYVASGEKKVNAFTQLVSVLDFELNTQVALFADEKTLEAAKRRSYQSGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLLGNQPPAFDILYWNND TTRLPAALHGEFVELFKSNPLNRPGALEVSGTPIDLKQVTCDFYCVAGLNDHITPWESCYKSARLLGGKCEFILSNSGHIQSILNPPGNPKARFMTNPEL PAEPKAWLEQAGKHADSWWLHWQQWLAERSGKTRKAPANLGNKTYPAGEAAPGTYVHER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site