Strain | Pseudomonas aeruginosa C41 genomic scaffold adgfh-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGTCCGGCACCGCCTTGCGCATGGGCGAGGTGGTAGCCCAGGCGCTCGGCCGGGACCTCCAGGAAGTGGCGGTCTACGGACGCGAGGGGCAGACCGGCG CGCGGGCGCGGGAAACCATCGGCTTCGCCACCGTGCGCGCCGGTGACGTGGTGGGCGACCACACCGTGCTGTTCGCCGCCGAGGGCGAGCGCGTGGAGAT CACCCACAAGGCTTCCAGTCGCATGACCTTCGCCCGTGGCGCGGTGCGTGCGGCGCTGTGGCTGGAGGGCAAGGAGAACGGCCTGTACGACATGCAGGAT GTGCTCGGCCTACGCTGAGGCGCTGCCGCACGTCGTCTTATTGGTGGACCGGAATGTCGCGATTCTGTAAACTACAGCTTTAGTGTGTCCACTAAAAGCA GCGCAGCATGAATCGAAAAAAAGCGGGATGACTCTTCACGGTGTCATCCCGCTTTTTTACACCTGCGCGACCAGTCAGGCTTGATTTACGGGAGGTCTTC
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DNA Sequence for Gene |
>Q088_05458
TTGACTAAGCCAGCCATACTTGCACTTGCCGACGGCAGCATTTTTCGCGGTGAAGCCATCGGTGCCGACGGCCAGACCGTTGGCGAGGTGGTGTTCAACA CCGCCATGACCGGCTACCAGGAAATCCTTACCGATCCTTCCTACGCCCAGCAGATCGTCACCCTGACCTACCCGCACATCGGCAATACCGGTACCACCCC GGAAGACGCCGAGGCCAACCGCGTCTGGGCCGCCGGCCTGATCATCCGCGACCTGCCGCTGATCGCCAGCAACTGGCGCAGCAAGCAGTCGCTGCCTGAC TACCTGAAAGCCAACGGCACCGTCGCCATCGCCGGCATCGATACCCGTCGCCTGACCCGCATCCTCCGCGAGAAGGGTTCGCAGAACGGCTGCATCCTGG CTGGTGCCGACGCTACCGAGGAACGCGCGCTGGAGCTGGCTCGCGCCTTCCCCGGCCTGAAGGGCATGGACCTGGCCAAGGAGGTCACCACCGCCGAGCG CTACGAGTGGCGCTCCAGCGTCTGGAACCTGGAAAGCGACAGTCATCCGGAGATCCCGGCCGGTGAACTGCCGTATCACGTGGTGGCCTACGACTACGGC GTGAAGCTGAACATCCTACGCATGCTGGTGGCGCGCGGCTGCCGCCTGACCGTGGTGCCGGCGCAGACACCGGCCAGCGAAGTGCTGGCGCTGAACCCTG ACGGCATCTTCCTTTCCAACGGCCCCGGCGACCCCGAACCGTGCGACTACGCGATCCAGGCGATCCGCGAATTCCTCGATACCGAGATCCCGGTGTTCGG CATCTGCCTCGGCCATCAGTTGCTGGCCCTGGCCTCTGGCGCCAAGACCCTGAAGATGGGCCACGGGCACCACGGCGCCAACCACCCGGTGCAGGACCTG GACAGCGGCGTGGTGATGATCACCAGCCAGAACCACGGTTTCGCGGTCGACGAGAGCACCCTGCCGGACAACCTGCGAGCCACTCACAAGTCGCTGTTCG ACGGTACCCTGCAGGGTATCGAGCGCACCGACAAGGTCGCTTTCAGCTTCCAGGGCCACCCCGAGGCGAGCCCCGGTCCGCATGACGTCGCCCCGCTGTT CGACCGCTTCATCTCGGCGATGGCCGAGCGTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCAGAGCCATGCCGACCCTGGGGATAACCGATTTCTGGACCTACGTGCTGGGTGTGGTTTTCGTGATCCTGTTGCCCGGACCGAACTCGTTGTTCGT CCTCGCGACTTCGGCCCAGCGTGGCGTGGCGACCGGCTACCGGGCCGCCTGCGGCGTGTTCCTCGGAGACGCGGTGCTGATGCTGCTGTCGGCCCTCGGT GTGGCCTCCCTGCTGAAGGCCGAGCCGATGCTGTTCATCGGCCTGAAGTACCTCGGTGCGGCCTACCTGTTCTATCTCGGCGTCGGCATGCTGCGGGGCG CCTGGCGCAAGCTGCGCAATCCCGAGGCGACGGCGGCGCAGGCCGAAAAGGTGGATGTCCACCAGCCGTTCCGCAAGGCGCTGCTGCTCAGCCTGTCGAA TCCCAAGGCGATCCTGTTCTTCATCTCCTTCTTCATCCAGTTCGTCGATCCCGGCTATGCCTATCCGGGGCTGTCGTTCCTGGTGCTGGCGGTGATCCTG
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Amino Acid Sequence |
>carbamoyl phosphate synthase small subunit
MTKPAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTGTTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPD YLKANGTVAIAGIDTRRLTRILREKGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSVWNLESDSHPEIPAGELPYHVVAYDYG VKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNGPGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPVQDL DSGVVMITSQNHGFAVDESTLPDNLRATHKSLFDGTLQGIERTDKVAFSFQGHPEASPGPHDVAPLFDRFISAMAERR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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