Strain | Pseudomonas aeruginosa C41 genomic scaffold adgfh-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGTTTACCTATCTCGCCGATGACGCCACCTTGCGTACCCTGACCTTCTGGAACCTGGGCAGCCTGAACGGCGCCAGCTACCCACGACTCTGGCCGCTGC TGCTGGTGGCGCTGCTGGTGGCCTGCTGGCTACCGCGCCGGGCAGATGCGCTGAACGCACTGCTGCTCGGCGAGTCCGAGGCCCGTCACCTGGGCTTCGA CGTCGAGCGATTGAAGGCCGAACTGGTGCTTTGCACTGCCCTTGGCGTCGGCGCCGCAGTGGCGGCGGCGGGGATGATCGGCTTCATCGGCCTGGTGGTG CCGCACCTGATCCGTCTGGTTGCCGGTCCGGATCATCGGACGTTGCTGCCGGCCTCGATGATGGCCGGCGCCATTCTCCTGCTGCTTGCCGACCTGCTGG CGCGCCTGGCGCTGGCTCCGGCGGAGTTGCCGATCGGCATCGTCACGGCACTGATCGGCGCGCCGTTCTTCCTTTATCTGCTATTGCGGGGGCGGGCCTG
|
|
DNA Sequence for Gene |
>Q088_05404
ATGCTGCGCGTGGAGAACCTGTCCATCCGCCGTGGCGGAAAGACTGTACTGGAAGGCCTCGAACTGGAGCTGCGGCCTGGCGAGATGCTCGGCGTACTCG GCCCCAACGGCGCTGGCAAGAGCACCTTGCTTGGCGCTCTCTGTGGCGAACTGGAGCCGGCCGAAGGGCTGGTGCTGCTCGACGAGCGCGGCCTCGACGA CTGGCCGGGCGTCGCTCGCGCGCAGCGCCTGGCGGTGCTGCTGCAGAGTTCGTCGCTGGGCTTCGCCTTTCCGGTGGAGGCGGTGGTCGGCTTCGGTCGG CTGCCCCATTCCAGCGGCCGCGAGCGCGATGTGCAGATCGTCGCCGAGGCCTTGGCGGCGGCCGACGCCAGTCATCTGGCCGGGCGCAGCTACCTGGCGC TGTCCGGCGGCGAACGCCAGCGCGTGCACCTGGCGCGGGTGCTGGCGCAGCTGTGGCCGGGCGAGCCGGGGCAGGTGCTGCTGCTCGACGAACCGACCTC GGCGCTCGACCCGCTGCACCAGCACACCACCCTGCAGGCGGTGCATGATTTCGCCCGCCGCGGTGCCTCGGTGCTGGTGATCCTCCACGATCTCAACCTG GCCGCGCGCTATTGCGACCGCCTGCTGCTGTTGCAGAATGGTCGCCCGCACCTGCTCGGTACGCCCGAGGAAGTCCTGCGCCCCGAGCCGTTGCGCGCGG TGTTCGGCCTCGAGGTCCTGGTTCAGCGTCATCCCGAGCGAGGTCATCCGCTGATCGTCGCCCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGGAGTCGCCATGCGCATTCGCCTGTTCGCTTTCTGTCTGCTGCTGCTGGGCGGCTGCCAGTCCCAACTGCCGCCGCTGCCTGATTGGCAGAGCCCGGAA GGGCGCGACGATCCGCAGACGGGACGAATAGTCGAATTGCGCAGCGGCGTGACGCTGAGCCCGCAGCAACTGGTCGCACGCCTGGCGGCCGCGCCGCGAG TGATCGTCGGCGAGAAGCACGACAATCCCGATCATCATGCCGTGGAACTGTGGCTGGCGCAGGCCCTGGGCGAATATCGGGCGCAGGGCAGCCTGCTGCT GGAAATGCTCGATCCCGGCCAGCAACCACGGGTGGATGCGGTCCGCGCACAACTCGGGACCGGCAAGCCGGTGGCGAACCTGGAGCAGGCCCTGGACTGG CAGAAAGGTTGGGACTGGACGCAGTACGGACCCCTGGTGTCCTGGGCGGTTGCGCAACCCGCGCCGTTGCTGGCGGCGAACCTCCAGCGGAGCGAGATCA
|
|
Amino Acid Sequence |
>hemin import ATP-binding protein HmuV
MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGLVLLDERGLDDWPGVARAQRLAVLLQSSSLGFAFPVEAVVGFGR LPHSSGRERDVQIVAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDPLHQHTTLQAVHDFARRGASVLVILHDLNL AARYCDRLLLLQNGRPHLLGTPEEVLRPEPLRAVFGLEVLVQRHPERGHPLIVAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|