Strain | Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGGATGCCGACGATTCTTCCAGGCCCGCTCCAGCGGCCAGCGGATGGCGGCGATCAGCAGGTACAGGCCGAAACCGAGCAGCGCCACCAGGGCCAGGTC AGAGACCGCGCGCCAGGCGTTGTTGCCGACCTTGAACACGACATCCAGCGCGGTGATGGCGATGGCCGGGGCGTAGAGGTCGTTCTGCGGGTCCACCGGA GTCGGCGTGAACAGCAGGATGAAGACGATCAGCCGCAGGGGTTCGCGCAGCCAGCGCCACATCCAGCCGGTCATCAGCCAGAACACCAGCATCAGGCCGA GTCCGGCGATGGCGTAGGCGCCCCAGGCGATCAGATAGTCTTGTTCATTCATGCGGCGTGCGTGGCGATAGCGGTGATGGGGGGCTTATGATAGCCGCTT TTGCATGCCGACGCGCCTACCCACCGATGGCGGGCGCCGCGCCGCCAGTTTTATTCAGATTTCCCGGCCTCGCGCATGGCCGGATCGACGAGGATTCCCG
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DNA Sequence for Gene |
>Q092_03370
ATGCCCCATCCGCAGCCCCCCATCGCCCGCCGCGACGCCGGAAGCGACCCCTACGCCTGGCTGGAGGAGCGCGACGCCCCGGAGGTGCTCGACTACCTGA AGGCCGAGAACGCCTACCTGGATAGCGAACTGGCCGACCAGGCCGGGTTGCGCGAGACCCTGTTCGAGGAGATCAGGGGACGCATCCGCGAGACCGACCT GTCGTTGCCCAGTCCGTGGGGTCCGTGGCTGTACTACCAGCGCACCACCGCCGGCGACGAATACCCGCGCCACTACCGCTGCCCGCGTCCGGCGGACGGC AGCCTGGCGGTCGACGAAGGCGCCGAGCAACTGTTGCTCGATCCCAACCAGTTGGCCGACGGCGGCTTCCTCTCCCTCGGCGCCTTCAGCATCAGCCCCG ACCAGAGCCTGCTGGCCTACAGCCTGGACACCAGCGGCGACGAGATCTACCGCCTGTTCGTCAAGGACCTCGCCAGCGGCGCGGTGCAGGCCCTGCCCTT CGACGACTGCGACGGCAGCCTGACCTGGGCCAACGACAACCGCACGCTGTTCTTCGGTGAACTGGATGACACCCACCGCCCGCACAAGCTCTATCGCCAC CGCCTGGGCGAGGCCGGCGCCGAGCTGGTGTTCGAGGAAGGCGACGGGCGCTTCTTCCTGCACTGCTACCGCTCCAGCTCGGAACGCCAGCTGATCCTCC TGCTCAACAGCAAGACCACCAGCGAGGCCTGGGTGCTCGACGCCGACCAGCCGCAGGGAACGTTCCGTTGCCTGGCGCCGCGCGAGGAAGGCCACGAGTA CTACCCCGACCACGGTCGCCTCGACGGCCGGGGCCTGTGGCTGATCCGCAGCAACCAGGCGGGGATCAACTTCGCCCTCTACCAGGCCGAGGAGTCGCGG CCGACTCGCGAGCACTGGCAACTGCGCGTGGCCCACGACCCGCAGCGGACCCTGGAAGATGTCAGCCTGAACGCCGAGGCGGTGATCCTCGGCCTGCGCG ACGGCGGCCTGCCGGTGATCGAGGTGCAACCGCAGGGCCTGCCGGCCTACCGCGTGCAGTTGCCGGACGCCGCCTACAGCCTCTACGTGCAGGACAGCCT GGAATTCGACAGCCCCTGCGTGCGACTGCGCTACGAGGCCCTGAATCGTCCGGCGCAGGTACGCCAGCTGAACCTCGCCGATGGCACGCAGACCGTCCTC AAGCAGACCCCGGTGGAAGGCCCATTCGACGCCGACGCCTACGCCAGCCGGCGCATCTGGGCCAGCAGCGGCGACGGCACGCAGGTGCCGGTCAGCCTGG TGGCGCGCAAGGAAGTCCTCGACGGCATCGCCGCCGGGCGCCCCGCGCCGCTCTATCTCTATGGCTACGGCGCCTACGGGCATAGCCTCGATCCCTGGTT CTCCCACGCCCGCCTGAGCCTGCTCGAACGCGGCTTCGTCTTCGCCATCGCCCATGTCCGTGGCGGCGGCGAACTGGGCGAAGCCTGGTACCGGGCCGGC AAGCTGGAACACAAGCAGAACAGCTTCGACGACTTCATCGCCTGCGCCGAGCACCTGCTCGCCGAGGGCTACTGCCGTCCCGAGGGCCTCGCCATCAGCG GCGGCAGCGCCGGCGGGCTGTTGATCGGCGCGGTGCTCAACCAGCGCCCGCAACTGTTCGGCGCGGCCATCGCCGAGGTGCCGTTCGTCGACGTGCTGAA CAGCATGCTCAATCCGGACCTGCCGCTGACCGTCACCGAATACGATGAGTGGGGCAACCCGCAGGAGCCCGAGGTGCATGCGCGGATCGCCGCCTACGCG CCCTACGAGAACGTCAGGGCCCAGGACTACCCGCACCTGCTGGTGGTCGCCGGCTACAACGACAGCCGCGTGCAGTACTGGGAAGCCGCCAAGTGGGTGG CGAAACTGCGGGCGACCAGGACCGACGCCAACCTGCTGCTGCTCAAGACCGACCTCGGCGCCGGCCACGGCGGCATGAGCGGCCGCTACCAGGGGCTGAA GGACGTGGCGCTGGAATACGCCTTCCTGCTCAAGGTCCTCGGCCTGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCACCGCGGGGGCCGGCGACGCCGGCCTTCCGCCACGAAAAAGGGAACCTTCGTGAAACGACGCTTCTGGCCCGCCATGGGCCTGCTCGCCGCGATCATG CTGGCCGTCTACCTGGCGAATCCGTTCGGCACCGCCAGTCTCGACCCGCGCGCACGGCTCCTCGGCGTGGCGCTGTACAAGATCCCTTCGCGCTCGATGG AACCGACCTTGCAACAGGGCGACTTCATCCTCGCCAACGCCGCGCGCTACGCCTTCGCCGACCCGCAGGTCGGCGACCTGGTGGTGTTCCGCTTCCCGCC GCAGCGCAGCATCGCCTATGTGAAGCGCATCGCCGGGATACCCGGCGATCGCGTGCGGATCGATGGCGGCCGGCTCTACGTCAATGAGCGCCCGGTGACG GAGCCCTACCTGGCGCAACAGGCGCTGCGCCAGCCGGACTCCCTGCGCATGGCCGAGCGGACCGTCCCCGCCGGCCAATACTTCATGCTCGGCGACAACC
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Amino Acid Sequence |
>peptidase S9
MPHPQPPIARRDAGSDPYAWLEERDAPEVLDYLKAENAYLDSELADQAGLRETLFEEIRGRIRETDLSLPSPWGPWLYYQRTTAGDEYPRHYRCPRPADG SLAVDEGAEQLLLDPNQLADGGFLSLGAFSISPDQSLLAYSLDTSGDEIYRLFVKDLASGAVQALPFDDCDGSLTWANDNRTLFFGELDDTHRPHKLYRH RLGEAGAELVFEEGDGRFFLHCYRSSSERQLILLLNSKTTSEAWVLDADQPQGTFRCLAPREEGHEYYPDHGRLDGRGLWLIRSNQAGINFALYQAEESR PTREHWQLRVAHDPQRTLEDVSLNAEAVILGLRDGGLPVIEVQPQGLPAYRVQLPDAAYSLYVQDSLEFDSPCVRLRYEALNRPAQVRQLNLADGTQTVL KQTPVEGPFDADAYASRRIWASSGDGTQVPVSLVARKEVLDGIAAGRPAPLYLYGYGAYGHSLDPWFSHARLSLLERGFVFAIAHVRGGGELGEAWYRAG KLEHKQNSFDDFIACAEHLLAEGYCRPEGLAISGGSAGGLLIGAVLNQRPQLFGAAIAEVPFVDVLNSMLNPDLPLTVTEYDEWGNPQEPEVHARIAAYA PYENVRAQDYPHLLVVAGYNDSRVQYWEAAKWVAKLRATRTDANLLLLKTDLGAGHGGMSGRYQGLKDVALEYAFLLKVLGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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