Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_17.18_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCCGCAAGCTGTTCGAAAGCCGCCGCTATTTCTACGCCAGCCCCGGTTACCTGCAGGCCCACGGAACGCCGCGGAGCACTGCCGAGCTGGCCGGCCAC CGGGCCATCCTGCTGCCCAGCGACTCGCAGCGCTACTGGCCGCTGGCGAACGAGAGCGTGCCCTGCCAGCGGGTGTTGTTCTGCAACAACATCACCTTCG TGCGCGAAGCGGCCATCGCCGGAGCCGGGATCTGTGGCCTGCCGGCGATGATCTGCCAGGAGGCCCTGGCCGCCGGCAGCCTGGTGCAGCTGCTGCCGGA GGCCCGACTGTCCTCCGGCGAGCTCTACGCCCTGTATCCGTCACGGCGTTTCCAGGCGATGAAGGTCAAGGCCTTCCTCGACTTCCTGATGCGCAGCCTG GCGGTGGACGAGGGCCGCGTGCTGGAGCCGACCTCGGTCGGCCTGATAACATCGCGACTTTGATCCCTTCCTCTGTTTCGCCTCTTCCCGAGAGATTTCC
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DNA Sequence for Gene |
>M905_RS0110805
ATGACCACTGTTCGCACCCGCATCGCGCCGTCGCCCACTGGCGATCCGCACGTCGGCACCGCCTATATCGCTTTGTTCAACCTGTGCTTCGCCCGGCAGC ACGGCGGTCAGTTCATCCTGCGCATCGAGGATACCGACCAGTTGCGCTCGACCCGCGAGTCCGAACAGCAGATCTTCGACGCCCTGCGCTGGCTGGGCAT CGAGTGGGACGAAGGCCCGGACGTCGGCGGCCCGCACGGCCCCTACCGGCAGAGCGAGCGTGGCGAGATCTACAAGAAGTACTCGGACGAGCTGGTCGCC AAGGGCCACGCCTTCCCCTGCTTCTGTTCCGCCGAGCGCCTGGAGAAGGTGCGTGCCGAGCAGATGGCGCGCAAGGAAACCCCGCGCTACGACGGCCACT GCCTGCACATCGATCCGGCCGAGGCGCAGCGCCGGATCGCCGCCGGCGAGCCCCACGTGGTGCGCATGAAGGTGCCCAGCGAGGGCATCTGCGAGGTGCC GGACATGCTCCGCGGCACCGTGGAGATCCCCTGGGACCGCATGGACATGCAGGTGCTGATGAAGGCCGACGGCCTGCCCACCTACTTCCTGGCCAACGTG GTGGATGACCACCTGATGGGCATCACCCACGTGCTGCGCGGCGAGGAATGGCTGCCTTCGGCGCCCAAGCTGATCAAACTCTACGAATACTTCGGCTGGG AGCAGCCCAAGCTCTGCTACATGCCGCTGCTGCGCAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCCACCTCGATCACCTTCTACCAGCGCAT GGGCTTCCTCCCGGAGGCCATGCTCAACTACCTGGGGCGCATGGGCTGGTCGATGCCCGACGAGCGCGAGAAGTTCTCCCTGGCCGAGATGATCGAGCAC TTCGACCTGTCGCGGGTCTCCCTGGGTGGGCCGATCTTCGACCTGGAGAAACTCTCCTGGCTGAACGGCCAGTGGCTGCGCGAGCTGCCCCTGGAGCGCT TCGCCGAGGAGGTGCAGAAGTGGGCCTTCAACCGCGACTACCTGATGAAAATCGCCCCGCACGTGCAGGGCAGGGTGGAGACCCTCAGCCAGATCGCCCC GCTTGCCGGCTTCTTCTTCACCGGCGGGGTGCCGCTGGACGCCAGGCTGTTCGAGCACAAGAAGCTGTCGCCCGACCAGGTGCGCCAGGTCCTGCAGCTG ATCCTCTGGAAGCTGGAGGCTCTGCGCCAGTGGCAGAAGGACAGGATCACCGCCTGCATCCAGGCCGTGGCCGAGCACCTGGGGCTCAAGCTGCGCGATG TGATGCCGCTGATCTTCCCGGCGATCACCGGCCAGGCCAGCTCGGTCTCGGTGCTCGACGCCATGGAGATCCTCGGCGCCGACCTGTCGCGCTACCGGCT GCGCCAGGCCATCGAGCTGCTCGGCGGGGTGTCGAAGAAGGAAAGCAAGGAGTGGGAGAAGCTGCTGGCGGCCATCCCTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGCCAGGGTAAGTGGTTGTTCTAACGGTGAATTTTTTTCGCCAAGGCGGAAAAATTCTGTTGACAGCCCGGCGGGGCGCCCCTAATATGCGCCCCGTC CAAGCGACGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATCCCGTCTAGCTCCACCAAATTTGCCGCCGAACG AATTTCCAGCGCGTTCGGTCTACCGAAGGATTTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAG GGGACGCCACTTCAAAGCAGCATCCGTGCTGCGCGTCGCGAGACGTAAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGT CGACGGTTCGATCCCGTCTAGCTCCACCAAATTCCACACAAGGCCAGCCTCAGCGCTGGCCTTGTTCGTCGAAGGATCCGTCCCCTTCGTCTAGTGGCCT
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Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRESEQQIFDALRWLGIEWDEGPDVGGPHGPYRQSERGEIYKKYSDELVA KGHAFPCFCSAERLEKVRAEQMARKETPRYDGHCLHIDPAEAQRRIAAGEPHVVRMKVPSEGICEVPDMLRGTVEIPWDRMDMQVLMKADGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPKLCYMPLLRNPDKSKLSKRKNPTSITFYQRMGFLPEAMLNYLGRMGWSMPDEREKFSLAEMIEH FDLSRVSLGGPIFDLEKLSWLNGQWLRELPLERFAEEVQKWAFNRDYLMKIAPHVQGRVETLSQIAPLAGFFFTGGVPLDARLFEHKKLSPDQVRQVLQL ILWKLEALRQWQKDRITACIQAVAEHLGLKLRDVMPLIFPAITGQASSVSVLDAMEILGADLSRYRLRQAIELLGGVSKKESKEWEKLLAAIPS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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