Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_17.18_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCTCGCGGGCCAGCACCTCGCGCAGGGTTGGCTCGTCGCCCTCGTCCTGGGCCGGTGCGGCCTCGGCCCTGCGCCGCTTCCACCAGCTCTCCAGCGG CCAGCGGATCAGCACGAACAGCAGGTAGAGGACGAAGGCGATGATGCCGTACAGGGCCAGGTCGGCCACCGCGCGCCAGGCGTTGTTGCCGACCTTGAAG GCCAGATCCAGGGCACTGATGGCGATGGCCGGGGCGAACAGCTCGCGGGCCGGATCGACGATGGTCGGGGTGAACAGCAGAACGGCCACCAGCACGCGCA GCGGCTCGCGCAGATAACGCCACATCCAGCCGGTCATCCGGAACCAGACCAGCAGGCAACCAAGCGCGGCGACCGCATAGGCGCCCCAGGCGAGCAGGTA GTCGTTTTCGATCATCGCGTTCCGTGGCGAGGCTGACAAAGGGGCGCTTATCATAACGGCTTTTCGCCGGCCCGGCGCACCTGCCGTCCGCAACAGAGGA
|
|
DNA Sequence for Gene |
>M905_RS0110690
ATGCCCATGCCCCAACCTCCCGTCGCCCGCATCGAACCCGGCTCCGATCCCTACCGCTGGCTGGAGAACCGCGACGCTCCGGAGGTGCTGGAGTACCTGA AGGCGGAAAACGCCTATCTGGAGACCGAGCTGGCCGACCAGGCCGAGCTGCGCGAGCGGCTGTTCCAGGAGATCAAAGGCCGCATCCGCGAGACCGACCT GTCCCTCCCTGTGCCCTGGGGCCCCTGGCTGTACTACACGCGCACCAGCGCCGGCGACGAGTACCCGCGCCACTACCGCTGCCCACGCCCGGCCGACGGT TCCCTGAAGGTGGACGAAAGCGCCGAGCAACTGCTGCTCGACCCCAACGCCCTGGCCGGCGGTGGCTACCTGTCCCTGGGCGCCTTCAGCATCAGCCCAG ACCACGCCTGGCTGGCCTACAGCCTGGACAGCAGCGGCGAGGAAGTCTTCCGCCTCTACGTCAAGAACCTGGCCAGCGGCGAGGTCATCCCCCTGCCCTT CGAATCCTGCGACGGCAGCCTGACATGGGCCAACGACAACCGCACCCTGTTCTTCGCCACCCTGGACGACACCCACCGCCCGCACAGGCTGTTCCGCTAC CGCCTGGGCGAAGCCAGCGCCGAGGAAGTGTTCCACGAGCCGGACGGGCGCTTCTTCCTCAGCTGCTACCGCTCCAGCTCCGAGCGTCAACTTCTGTTGC TGCTCAACAGCAAGACCACCAGCGAGGCCTGGGTGCTGGACGCTGAACATCCGGAGCAGGCCTTCCGCTGCCTGGCACCCCGCGAAGAAGGCCACGAGTA CTACGTCGATCACGGCTGCCTGGACGGTGCCTGGGCCTGGCTGATCCGCAGCAACCAGGCCGGCATCAACTTCGCGCTCTACGCCGCCCCGGATGCTACC CCAGAGCGTCCCTACTGGCGCGAGCTGATCGGCCACGACCCGCAGGTGATGCTCGAGGACGTCAGCCTGAACCGCGACGCCCTCGTCCTCAGCCTGCGCG AGCAGGGCCTGCCAATCATCGAGGTGCGTGCCGCCGGCCAGGCACCGGCGCGGGTCAAGCTGCCGGATGCCGCCTACAGCCTGTACGTGCAGGACAATCT GGAATTCGACAGCCCGGTGATCCGCCTGCGCTACGAGTCGCTGAACCGCCCCGCGCAGATCCGCCAATTGGACCTGGCCAGCGGCGAGCAGACGGTGCTC AAGGAAACCCCGGTGGAAGGCCCCTTCAACGCCGACGCCTACGAGAGCCGCCGGATCTGGGCCACAGCGCCGGACGGTACCCAGGTGCCGATCAGCTTGG TGGCGCGCCGCGAAGTGCTCGCCGCCGGCCGCCCGGCGCCGCTCTACCTGTACGGCTACGGCGCCTATGGCTCGAGCCTGGATCCTTGGTTCTCCCACGC CCGCCTGAGCCTGCTGGAGCGCGGTTTCGTGTTCGCCATCGCCCACGTGCGCGGCGGTGGCGAGCTGGGCGAGGCCTGGTACCGGGCCGGCAAGCTGGAG CACAAGCACAACACCTTCGACGACTTCATCGCCTGTGCCGAGCAGCTGATCGCCGCCGGCTACACCACCCCGCAGCGCCTGGCGATCAGCGGTGGCAGCG CCGGCGGCCTGCTGATCGGCGCGGTGCTCAACCAGCGCCCCGAGCTGTTCGCCGCAGCCATCGCCGAGGTGCCCTTCGTCGACGTGCTGAACACCATGCA GAACCCCGAGCTGCCGCTGACCGTCACCGAGTACGACGAATGGGGCAATCCCAGCGACCCGGTCGTCTACCAGCGGATCAAGGGCTACGCGCCCTACGAG AACGTCCGCGCCCAGGCCTACCCGGCGATCCTCGTCGTGGCCGGCTACAACGACAGCCGCGTGCAGTACTGGGAGGCTGCCAAGTGGGTGGCCAGGCTGC GCGCCAGCAAGACCGACAGTAACCTGCTGCTGCTGAAGACCGACCTGGATGCCGGCCACGCCGGGATGAGCGGCCGTTACCAAGCGTACCGGGACGCTGC CCTGGAATACGCCTTCCTGTTCAAGGTGCTGGGAATCGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGGAGGCGGCGCCGGCTGCTCGAGCCGCCGACGCCGGAAGGGTCAGAGGCCCATCTGCTTGGCGATGATCTCGTTCATCACCTCGCGGGTGCCGCCGCCG ATGGAGAGGATGCGGTTGTCGCGGTACAGCCGCTCCACCAGGCTCTCGCGCATGTAGCCCATGCCGCCGAGGATCTGCACGGCATCGTAGGTGATGCGGT CGGCCACGTCGGTGGCGAAGTTCTTGGCCATGGAGATTTCCTTGATCACGCTCTTGCCGGCGGCCATCTTCGCCGCCTGGCGGTAGGTGAACTCCCGCGA CGCCTCCAGCTGGGTGGCCATCTCCGCCAGACGGTGCTTGAGCACCTGGAACTTGCCGATCGGCTTGCCGAAGGCCTCGCGCTGGCGGGCCCAGGCCATG GCCTCCTCGAGGGCCATCTGCGAGGTCATGTTGGCCATCAGCGCCAGGGCCAGGCGTTCGCTCTGGAAGTTGGCCATGATGCAGGCGAAGCCGGCGTTCT
|
|
Amino Acid Sequence |
>peptidase S9
MPMPQPPVARIEPGSDPYRWLENRDAPEVLEYLKAENAYLETELADQAELRERLFQEIKGRIRETDLSLPVPWGPWLYYTRTSAGDEYPRHYRCPRPADG SLKVDESAEQLLLDPNALAGGGYLSLGAFSISPDHAWLAYSLDSSGEEVFRLYVKNLASGEVIPLPFESCDGSLTWANDNRTLFFATLDDTHRPHRLFRY RLGEASAEEVFHEPDGRFFLSCYRSSSERQLLLLLNSKTTSEAWVLDAEHPEQAFRCLAPREEGHEYYVDHGCLDGAWAWLIRSNQAGINFALYAAPDAT PERPYWRELIGHDPQVMLEDVSLNRDALVLSLREQGLPIIEVRAAGQAPARVKLPDAAYSLYVQDNLEFDSPVIRLRYESLNRPAQIRQLDLASGEQTVL KETPVEGPFNADAYESRRIWATAPDGTQVPISLVARREVLAAGRPAPLYLYGYGAYGSSLDPWFSHARLSLLERGFVFAIAHVRGGGELGEAWYRAGKLE HKHNTFDDFIACAEQLIAAGYTTPQRLAISGGSAGGLLIGAVLNQRPELFAAAIAEVPFVDVLNTMQNPELPLTVTEYDEWGNPSDPVVYQRIKGYAPYE NVRAQAYPAILVVAGYNDSRVQYWEAAKWVARLRASKTDSNLLLLKTDLDAGHAGMSGRYQAYRDAALEYAFLFKVLGIE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|