Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGACGAGGTGCGTGTGGTCTTGCGTGAGGGGGAGCGCGGGGAGGATTTCGGGTTACCTGCCGGTTGCCGGGTAATCGGCAGCCCAGATGCCGCGTCCGGT ATGGGGCATAGCCTGGCTGTCGGGGCACGGTCGCTTCACGACAGCCAGGCACAGGCGGTAGCGATTTTGCTGGGTGACATGCCATGGATCGAGCCGGCAA CCCTGGGCCGGCTGGTCGGGGCCGCCCATGCGTCCCGTATCGTGCTGCCACGCCATGCAGGGCAGCAGGGGCACCCGGTGATCTTCGGGCGGGATTTCTG GCCGGCGCTGGGGCAACTGCATGGCGATGAAGGGGCACGCTCGGTGGTGCATGCTCACCGGGGTAGCTGTGTGGTGGTCGAGCTGGAAGATGCGGGGGTA TTGCTGGATGTCGACACGCCGCAGGGCCTCGCTTGGTTCATAATCCCACCTTAATCCGCCCAAGGTGCAATGCCAGCCATACCACTCCGGGAGCTCCACC
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DNA Sequence for Gene |
>D907_RS0124370
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTTACTGCCCAGGGCTTGACCGTTGACCGGGTGGGTAACGCCG CCGGTGCGCGGGCGATGCTGCAGGCCGCGCAGTTCGATGTGATGATTCTCGACCTCGGCCTGCCTGACGAAGACGGCTTGAAACTGCTGCGCCGCCTGCG CCAGCAGGGCGAAACACTGCCGGTACTGGTGCTGACTGCCCGTGATGCCGTCACCGACCGCGTCGATGGCCTGCAGGCCGGTGCCGACGACTACCTGCTC AAACCCTTCGACCTGCGCGAGCTGGCCGCTCGTCTGCACACCCTGCTGCGGCGGGTGGCGGGGCGGGCGGTGAATGTGATCGAGCACGGCCCGTTGCGTT ACGACCCCAGCAGCTGCGAGGCGACCCTGGCCGGGCGGCCGGTCGACTTGTCCCGCCGGGAGCAGGCCCTGCTCCAGGCATTGCTGCAGAACCCCGGGCG GGTGTTGTCCAGCGAACAACTGAAAGACTGCGTGTATGGCTTTAGCGACGAAGTCGAGAGCAACGCCCTGAACGTGCATATCCACCACCTGCGGCGCAAG CTGGGCAACGGCATCGTCGAGACCGTACGTGGCCTGGGTTACCGCCTGGGCCCGGCGCAGGCGCCGGAAGAGGCCGCATCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGCGGGTACGCCTTAGCCTGATCCTGGGCAGTGCCTTCGTGATCATCTGGGTGCTGGCCGCCGCGTGGATGCTGCGCGACCTGCGCCAGCAGATGAT GTTTTCCCTTGACCAGCGCCTGGTGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTCACCGCCAAGGGCGGGGAGGCGCAC ATTTCTGCCGACCAGTTCAGCGTGCCGGACGGCATGGCCTGCCAGGTCAGCTCGCTGCGTGGCGAGATCCTTGCCAGCAACCACAAGCACGATGGCGCCA TGGACGACGAGCGCAGTGGCTTCCGTGACCAGACGATCGACGGTGCACTGTGGCGTACCTTCACCTACAACCATGGTGATGTGCGCATCACCACGGCTGA CCGGCACATGGAGCGTGAGGCGCTGAACCAGTCGATTCTGCTGGCGGCTTCGGCACCGGTGCTGATGGCCCTGCTTGGCAGCCTGGGGTTGTTGTGGATT
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Amino Acid Sequence |
>transcriptional regulator
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAAGARAMLQAAQFDVMILDLGLPDEDGLKLLRRLRQQGETLPVLVLTARDAVTDRVDGLQAGADDYLL KPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGRPVDLSRREQALLQALLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRK LGNGIVETVRGLGYRLGPAQAPEEAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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