Pseudomonas sp. LAIL14HWK12:I6, D907_RS0124150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGTGATCTCCCGCGACGAGGGCGGCTTCAAGGGCCCGGCACTGCTGCAGAACATTCTGGAAAGTGGCTTGCGCTTCGGCGAAATGGACATCTTCCACC GCCACGAGAGCATGGCCGGCCACGGCGAAGTGCTGTTCTCCATGGCCAACGCGGTCAAGCCTGGCGTCTTCGACCTGGACGACATCGACCACTTCAGCAC CCGTGCCGTCAGCTTCTTCCTCGGCTTGCCGGGCCCGCGCCATCCGAAGCAAGCCTTCGACGTGATGGTGGCTGCGGCACGCAAGCTGGCCCACGAACTG AACGGTGAGCTCAAGGACGACCAGCGCAGCGTGCTGACCGCCCAGACGATCGAGCACTACCGCCAGCGTATCGTCGAGTTCGAGCGCCGCGCGCTGACCC AGAAGCGCTGATGTGCCCAAGTGGGCAGACCTCTGTCCACCCTGTTTCAAGCGCAAGAGCAGCCAAGGGCTGCTCTTTTGCTATGCAAGAGAACCTGAAA
DNA Sequence for Gene
>D907_RS0124150
ATGACCGCCGAAACCCGTATCCACGAACTGCGTGCCGAGCTCGACCAGCACAACTACCGCTACTACGTGCTCGATGAGCCCAGCGTGCCGGATGCCGAAT ACGACCGCCTGTTCAACGAGCTGAAGGCGCTTGAAGCCGAGCACCCGCACCTTGTCACACCCGACTCGCCCACCCAGCGTGTCGGCGGTGCTGCCCTGGC CGCCTTTAGCCAGGTGCGCCATGAAGTCCCGATGCTCAGCCTGGGTAACGCTTTCGAAGAAACCGACCTGCGTGAGTTCGGCCGCCGCGTTGTAGAAGGC CTCGATCAGCCTGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGACGGCCTGGCCGTGAGCCTGCTGTACCGCGATGGCCAGCTGGTGCAGGGCGCTA CCCGTGGCGATGGCACCACCGGCGAAGACATCAGCGCCAACGTGCGCACGGTGCGCAACATCCCGCTCAAGCTGCAGGGTGAGGGCTGGCCGGCGGTGCT GGAGGTGCGCGGCGAGGTGTACATGAGCAAGGCCGGTTTCGACCGGCTCAATGCAGCCCAGGCCGAAGCCGGTGGCAAGACGTTCGCCAACCCGCGCAAC GCCGCCGCCGGCAGCCTGCGCCAGCTGGATTCGAAAATCACCGCCAGCCGCCCGCTGGAGTTTTGCTGCTATGGCGTTGGTCAGGTGTCTGAAAGCATCG GCGACAGCCATATTGGCATCCTTGAACAGCTCAAAGCCTGGGGGATGCCGATCAGTCGCGAGCTCAAGCATGCGGCAGGCATCGAAGAATGCCTGGCCTA CTACCGCGACATCGGCGAGCGACGTAACAGCCTGCCGTATGAAATCGATGGTGTCGTGTTCAAGGTCAACAGCCTGGCCGCCCAGCGCGAGTTGGGCTTC CGTGCGCGTGAGCCACGGTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGACGTCGAATTCCAGGTTGGCCGCACGGGGG CGGTAACGCCTGTCGCGCGCCTGAAGCCGGTCAAGGTTGCGGGGGTGACCGTGTCCAACGCCACCTTGCACAACATGGACGAAATCGCCCGCCTGGGCCT GCGCATCGGTGACACGGTAATCATTCGCCGTGCCGGTGACGTGATCCCGCAGGTGATGCAGGTGGTGCTGGAGCGTCGCCCGGAAGATGCCCGCCCGGTC GAGGTGCCGAGCGCGTGCCCGGTGTGTGGCTCGCAGGTCGAGCGTACTCAATTGGTCAAACGCAGCAAGGGCAAGGAAACCACCAGCGAAGGCGCGGTGT ACCGCTGCGTTGGCCGCCTGGCCTGTGGCGCCCAGCTCAAGCAGGCGATCATTCACTACGTGTCGCGCCGTGCCATGGATATCGATGGCCTGGGCGAAAA GAGCGTCGAGCAACTGGTGGACGAAGGCCTGATCGGCTCGCCGGCAGACCTGTACAAGCTGGAGTTCGACCAGATCGTTGGCCTGGAAGGTTTCGCCGAA GTGTCCAGCAAGAAGCTGCTGGATGCCATCGAGGCCAGCAAGCGCCCGGCCTTGTCGCGGTTCATCTACGCTTTGGGCATTCCGGATGTAGGCGAAGAGA CTGCAAAGGTGCTGGCCCGCTCGCTGGGCAGCCTGGCGCGCGTGCAGCAGGCATTGCCGCAGGTGCTCACCTACCTGCCGGACATCGGCCTGGAGGTTGC CTACGAGATCCACAACTTCTTTGAAGACGAGCACAACCGCAAGGTCATCAAGCAACTGCTCGATAGCGGCATGCAACTGCAGGACGAGGGCGAACTGGCT GCCGAATTCGCCGCCAGCACCACCCTCGCCGGCATGATTGCCAAGCTCGACATTGCCTCGGTCGGCCCGACCGGGGCCGAGAAGCTGGTGGCCAAGCTCG ACACCCTGGAAAAGATCATCGCCGCCGACGGCATCGACCTGCGCCAGGCCCTTGCGGCCAAGCAGGCGGATGCCGTGCGTGAGTTCTTCAAGAATGAAGC GAACCAGAAGCTGGCGCGGGACATCGAAGCGCAGTTGCTGGCGTTCGGCATGCACTGGACCAGCGAGAAGAAGGTGGCCGAAGGTTTGCCGCTGGCAGGC CAGACCTGGGTGCTCACCGGCACCCTGGAGCGCATGAGCCGCGACATCGCCAAGGACAAGCTGGAAAACCTGGGGGCCAAGGTGGCGGGTTCGGTGTCTG GCAAGACCCACTGCGTGGTGGCCGGGCCAGGGGCGGGGTCCAAGCTGGCCAAGGCTGCCGAGCTGGGGGTGAAGGTGCTGGACGAAGATGCCTTTGTCAC CTTCCTGGCCGGGCAGGGGGTCACGGTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCCGGCGCGCGTTTCTTGTGGGGGCGGGTTTACCCGCGAAGAGGCCGGGGCTGCCACGTCAGCCCTGACAAGTCATTGAGAAATGATGACTTTTTCTC CCGCTAGAGGTTGTATCTGCCCCCAAGAACGGTACAATGGCGCCACTCGCTGTTCAGCGAGGCATGTAGTGGTGGCCCCATCGGTCCCCCCGCATTGATT ACCCGTTAACCTGGTCAGGCCCGGAAGGGAGCAGCCATAGCGGGAACATCGAGTGCCGGGGTGTGGCTGGTGGGGCCGCCTCCATTGCGCAAGTCCTTAA TTCTAAAGGACTTTTCTCGCTAAAAATCTCGAAGTGGAACAGTGCTTAGGTACACCGCAGTGGTGCACCGTAAAGGCATTCTATCTTCCATCATTCTACG TTCTCAATCCCGAAGGCGTTCAATCGCTGAACCTAAGGCATCTGCGTTGGTATCTAGAGCCTTCAGCGTAACCATCACGTTGTCATGAGCGATGGTTGAG
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MTAETRIHELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVGGAALAAFSQVRHEVPMLSLGNAFEETDLREFGRRVVEG LDQPGAVDYSCEPKLDGLAVSLLYRDGQLVQGATRGDGTTGEDISANVRTVRNIPLKLQGEGWPAVLEVRGEVYMSKAGFDRLNAAQAEAGGKTFANPRN AAAGSLRQLDSKITASRPLEFCCYGVGQVSESIGDSHIGILEQLKAWGMPISRELKHAAGIEECLAYYRDIGERRNSLPYEIDGVVFKVNSLAAQRELGF RAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMDEIARLGLRIGDTVIIRRAGDVIPQVMQVVLERRPEDARPV EVPSACPVCGSQVERTQLVKRSKGKETTSEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIDGLGEKSVEQLVDEGLIGSPADLYKLEFDQIVGLEGFAE VSSKKLLDAIEASKRPALSRFIYALGIPDVGEETAKVLARSLGSLARVQQALPQVLTYLPDIGLEVAYEIHNFFEDEHNRKVIKQLLDSGMQLQDEGELA AEFAASTTLAGMIAKLDIASVGPTGAEKLVAKLDTLEKIIAADGIDLRQALAAKQADAVREFFKNEANQKLARDIEAQLLAFGMHWTSEKKVAEGLPLAG QTWVLTGTLERMSRDIAKDKLENLGAKVAGSVSGKTHCVVAGPGAGSKLAKAAELGVKVLDEDAFVTFLAGQGVTV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site