Pseudomonas sp. URMO17WK12:I12, D882_RS0114380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGGCGTGCGCCAGATTCAGGTGCAGCCAGAGGAATTCTTGGCTGTCGTCGGGTTGTTGCAGGTATTGCAGCGCTTTGGCCGAATCGATCTCGCGACCAC GTTCACCGGGGCGAAAACTGAAACCGTAGAGCAGGCCGAACAGGTCCGTGTCGCGATGGCTTTGGTCGATGCTGTGGTTCATGAGTGCTCGCAAGGGGGC GCTATCGCTCTATGTAGCAGCTGGCGAAGCCTGCGGCTGCAGGGTCGAGTTGTGGCGGGTTTACAGGTTCACCTGAGCCGCATCATCGCAAGGATTCTTG ACGGTTGTGTGACGGATCAATGAAGGCCAAATAGTGGCTCTACCGACGGTCGGATTGGATTAAAGAACCGCTCTGGCACGCCGATCTCGCTTACGTTAAC GTGCGCGCCTTTGGCCACGAGCCAAGTCGCAGACAGGGACGTCCGGACACCTTTCACGCCATGTTGCGGCGTGTCTCACCCCTGTCATGAGTATCACTCG
DNA Sequence for Gene
>D882_RS0114380
ATGCTGCAAAAATCCCTGAGAGCACAAATCCTCGCCTTGTTGAGCGGCAGCCTGCTGGCGATGTTGCTGATCGCTTTGGCTTGCTTTCATTTCCTGTCCA GCGGTGTTCAGAGCTACGCGAACCTGATCGACGGCCCGCTGCACACTTCCCAGTTGATCGATGAAGCCAACCTGCAATTCAAGGTGCAGGTTCAGGAATG GAAAAACGTCCTGCTGCGCGGCAAACAACCGGCGGACCTGGACAAATACTGGAAGCAATTCGAAGACCGTCAGCGCGATGTGCAAAGCATCCTCGGTGAA CTGGCCGGGCAGAAGGGCATCGAGCCGCAACTCAAGACCCGCATCGAACGCCTGCGTGATGAACACCGCTTGCTGGGCACTGCCTATCAAAAGGGTCGCG ATGCCTACGTCGCAGCCGGTGCCGACCCGACTGCTGGCGATACCGCTGTGAAAGGCGTGGACCGCGCGGCCAGTGATCAGATGAGCGAACTGGTTGTCGA ACTGCGCAAACAGGGCGCCGAGCAGTCGAAGCTAATCAGTGCCGACGCTGACCGCACCGTGTTGCTGGGGATCATCGTGATGCTCGCCTCGGGCTTGCTG ATCGGTCTGTTGAGCCTGTGGCTGGTCAACCGCAATCTGGTTGAACCGATTCGCAAACTGATCGACTACGTGGCGCAACTCAGCCAGGGCAAATTCGCCG ATCGCGTGGCCAGCACCCGTCAGGATGAGCTGGGCAAACTGGCGGTCGCCGCCAATACCCTGCGCGATTTCCTCGCCGACACCTTCAGCCATTTGCAGCG CAGCGCCAAGGACCTCGACAGCGCCAGCGGCGAACTGAACGCCATCGCCAGCCAGATGGCGGGTGGCACCAACGAGCAGTTCAACCGCACTGATCAGGTG GCCACGGCGATGAATGAAATGTCCGCGACCGCGCAAGAAGTTGCGCGTCACGCCGCCGACGCCGCACGCGCTGCCGACGACGCTGACCAGTCCGCGCAGC AGGGCGAAAAAGTCATGCAGGGCACCATCCATACCATCACCCAGATGCGCGGTGAAATCGCCAACACCGCCACGGTCATTCGTCAGCTGGAAACCGACAG CGGCCGCATCGGCAAGGTGCTGGAAGTGATTCGCGGCATCGCCGAACAGACCAACCTGCTGGCGCTCAACGCCGCCATCGAAGCGGCCCGTGCCGGTGAA GCCGGGCGCGGTTTTGCGGTGGTCGCCGATGAAGTGCGCAGCCTGGCCCAGCGCACGGCGGCGTCGATCATCGAGATCAACCAGATCATTCAGACCGTGC AAACCGGCGCGGTGGACGCGGCGCAGGCGATTGAAAGCGGGCAGTCACGCAGTGAAGAAAGCGTGCAGCAAGTGACCGAGGCCGGCGCCATGCTGGAGCG GATCACCCAGGCCGTCGAAGCGATTCGCGACATGAACCGCCAGATCGCCACCGCTGCCGAAGAGCAGACCTCGGTGGCCGAGGACATCTCGCGCAACCTT ACCGAGATCACCAGCATCGCCAGTACCAATCTGGACAACGTGCAACGCACCGAAGCGGCAAGCCACAACCTGCACGGGGTGTCGTCGCAGTTGAATGAAG TGACGGCGCGTTTGAGCGCGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCGACGGCTGTGTACCGGCTCGCTTACCGAGTCGGTACACAGTCGATCTCAAGTGCGGCCGGGCCATGTCGATGTGGGAGATACCCAAATCCCACACT GGATACATCCCATGGTCAGCATCACCTCTGTCTCGATCAACCAGACCCTCACCACCTCCACCAGCAAAACCGCGATCAGCGATCCCGCCGCCGACACCTC CGTCACCGCCACCACCGAGACGCCTTCCGACGACAGCAAAGTGGCCGCCGGTGGCGCTCCCGCGTCGAGCGACAGCAGTTCCAGCAGCAGCGAAGAATCC GATGCGGTGAAAGCCTTGCGCAAGCAAATCGCCGAACTGCAAAAGCAGATGCAGGAACAACAGCAACAGCTGCAAGCAGCCCAGGCAAAACAGGAAGATG CCGACGCCAAAGCCGCTGATGTCGCGGCGGCTCAGTCGCAGGTGGCGACCACCTCAGGTTCGTTGCAGACAGCAACGGCGGCGTTGTTGCAGGCGTTGCA
Amino Acid Sequence
>chemotaxis protein
MLQKSLRAQILALLSGSLLAMLLIALACFHFLSSGVQSYANLIDGPLHTSQLIDEANLQFKVQVQEWKNVLLRGKQPADLDKYWKQFEDRQRDVQSILGE LAGQKGIEPQLKTRIERLRDEHRLLGTAYQKGRDAYVAAGADPTAGDTAVKGVDRAASDQMSELVVELRKQGAEQSKLISADADRTVLLGIIVMLASGLL IGLLSLWLVNRNLVEPIRKLIDYVAQLSQGKFADRVASTRQDELGKLAVAANTLRDFLADTFSHLQRSAKDLDSASGELNAIASQMAGGTNEQFNRTDQV ATAMNEMSATAQEVARHAADAARAADDADQSAQQGEKVMQGTIHTITQMRGEIANTATVIRQLETDSGRIGKVLEVIRGIAEQTNLLALNAAIEAARAGE AGRGFAVVADEVRSLAQRTAASIIEINQIIQTVQTGAVDAAQAIESGQSRSEESVQQVTEAGAMLERITQAVEAIRDMNRQIATAAEEQTSVAEDISRNL TEITSIASTNLDNVQRTEAASHNLHGVSSQLNEVTARLSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site