Pseudomonas chlororaphis O6, PchlO6_6237

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	10	510	0.0
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	1	81	1.4E-5
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	75	247	3.4E-52
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	86	242	8.7E-42
SMART	SM00086	pac_2	IPR001610	PAC motif	33	75	0.0088
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	262	509	2.88E-89
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	87	255	5.1E-50
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	91	248	6.83E-44
CDD	cd01948	EAL	IPR001633	EAL domain	263	502	7.62158E-115
SMART	SM00052	duf2_2	IPR001633	EAL domain	257	503	1.0E-117
Pfam	PF00563	EAL domain	IPR001633	EAL domain	263	498	5.3E-71
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	1	86	2.1E-15
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	87	245	4.15648E-53
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	85	244	4.1E-32
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	1	83	1.34E-12
Coils	Coil	Coil	-	-	251	271	-
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	258	512	2.7E-91
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	257	512	1.5E-101

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.