Pseudomonas chlororaphis O6, PchlO6_5850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCAGGTGATCGATCATCGCCGCCAGGGTGGTCGACTTGCCCGAACCGGTCGGTCCGGTCACCAGTACCAGGCCGCGGGGCACTTCGCTGATGCGGCGAA ACACCTCGCCCATGCCCAGTTCGTCCAGGCTCGGCACCTTGGCCGGAATGCTGCGAAAGACCGCGCCAGCGCCGCGCTGATGGTTGAAGGCATTGACCCG AAAGCGCGCCAGGCCCGGCACCGCGAAGGAAAAGTCGATCTCCAGCGCGGCCTTGAACTCGGCCCGCTGCGGGTCCGTCATGCTGGCCAGGATCAGCTCG TGCACCTGTTGCGCCTCCAGCACCGGCAGGTTGATCCGGCGAATATCGCCGTCGATGCGAATCATCGGCGGCAAACCGGCCGAGAGGTGCAGGTCCGAAG CGCCCTGTTTGACGCTGAAGGCCAGCAACTCAGTGATATCCATAGCGTTCCCCAATTCCAGTAGAATGCCGCGAACCCAAGACCCGCTGGCGTACATCGA
DNA Sequence for Gene
>PchlO6_5850
ATGTCCACGATAGCAGACAACATCGCCCTGGTTAGCGCACGGATCCGTGCCGCGGCGCAGGCCTCGCAACGTGACGAAAGCAGTATCCATCTGCTGGCCG TGAGCAAGACCAAGCCCGCCGCGGCGCTGCGTGAAGCCTATGCCGCCGGCCTGCGCGACTTCGGCGAGAACTACCTGCAGGAAGCCCTGGGCAAACAGGC GGAACTCGGCGACCTGCCCTTGAGTTGGCACTTCATCGGCCCCATTCAGTCGAACAAGACGCGAGCTATCGCCGAGAACTTCGCCTGGGTGCATTCCGTG GATCGCTTGAAAATCGCTCAACGCCTGTCCGAGCAACGCCCGGCCGACTTGCCGCCGTTGAACATCTGCATTCAGGTCAATGTCAGCGGCGAGGCCAGCA AGTCTGGCTGCACGCCGGCCGACCTGCCCGCCCTGGCCAGCGCCATCGGCGCCTTGCCGCGCCTGAAACTGCGCGGGCTGATGGCGATTCCCGAGCCGAC CGAAGATCGTGCCGCCCAGGACGCCGCCTTCGCGGCCGTACGCCGCCTGAACGAAAACCTGCACGCCAGCCTGGACCTGCCAACCGACACACTTTCCATG GGCATGAGCCACGACCTCGAAGCGGCCATCGCCCAAGGCGCCACCTGGGTACGTATCGGTACCGCCCTGTTTGGCGCTCGCGATTATGGCCAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGTGGCGGCCCCACCTCTGAATAAGGACCTGTCATGAGCAAGACTCGTATCGCCTTTATCGGCGCCGGCAACATGGCTGCCAGCCTGATCGGCGGCCTG CGCGCCAAGGGCCTGGACGCCAGCCAGATCCGCGCCAGCGACCCGGGCGCCGAAACCCGCGCCAAGGTCCAGGCCGAGCACGGCATTGAACTGTTCGCCG ACAACGCCGAAGCCATCGACGGCGTCGACGTGGTGGTGCTGGCGGTCAAGCCACAGGCCATGAAGGCCGTGTGCGAAGCCCTGCGCCCCAGCCTGAAGCC GCACCAGCTGATCGTGTCCATCGCCGCCGGCATCACCTGCGCCAGCATGAACACATGGCTCGGCGAGCAGCCGATTGTGCGCTGCATGCCCAACACCCCG GCCCTGCTGCGCCAGGGCGCCAGCGGCCTGTACGCCACCGCTGCGGTGAGCGCGGAGCAACGCCAGCAGGCGCAAGAGCTGCTGTCGGCCGTGGGCATCG
Amino Acid Sequence
>hypothetical protein
MSTIADNIALVSARIRAAAQASQRDESSIHLLAVSKTKPAAALREAYAAGLRDFGENYLQEALGKQAELGDLPLSWHFIGPIQSNKTRAIAENFAWVHSV DRLKIAQRLSEQRPADLPPLNICIQVNVSGEASKSGCTPADLPALASAIGALPRLKLRGLMAIPEPTEDRAAQDAAFAAVRRLNENLHASLDLPTDTLSM GMSHDLEAAIAQGATWVRIGTALFGARDYGQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site