Pseudomonas chlororaphis O6, PchlO6_5660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGCGCGGTTGCGTCGCATCGCTCTGCAGGTCGGGCAAGGTCAGGCTCAGGCTGCTCCAGTCGGCGTCCGGCAATCTGTTGCGCAAAGGGCCGATTGCT TGAGGCCAGTCGGCGGTTTCGCCTGCGCCGGGGATGATAATCACCGCGCCCTTGGGGTCGCTGCTGTTGGCCGGTTTCCACAGGGCCAGAAAGCTCTCGC TGCCGGCTTGCAGTGACTGTTGTTCGCCGGGCGGTATGACGCGTTCGAGGGCCGCGGCATCTTCCTGGCTACGCTCAAGGAGCGGCTGGCGCTCGGCCGG TTTTTCCACGGCAGCCTGTTCTGCCGGGGCGGGTTGCGGATCCTCGGCCTTGACCGAAAAGGCACAAGGCAGGATCAGCGACAGGCACAATGCAGGCAGT GCCGTGCGGTGGACAAGGGGCATCGGTTATTCCAGGCCAGAAGTAATCCCGGCAGCCTAATGGGTTGGTCAGTATTTGTCAGTGTGTGAGACTTCAGATG
DNA Sequence for Gene
>PchlO6_5660
ATGCGTTTTCGCTGCCTGCTGGTTATCGGCTGTATCTGCCTTCCCTTGATGGCCTGGGCGGTGCCTGCGCCGCATATCGCCCAGGCGCAGTGGAGCCCCG CGCAGCAGCAATGGCTGGAACAGCACCGGGAACTGCGGGTCGGCGTGGTGCTCCAGGCCCCCTACGCCCAGTACGACCGTCGGCTGCAACGCTTGTCTGG CGCCAATATCGAACTGATGCAGTGGCTGGCCCAGGCGATGAAGGTCGAGCTGAGTTGGCGCAACTTTGCCGATCAGGCGCAGCTGGAAGCGGCGGTACGC GCCGGTGAAGTCGATATGGCCCCGGGCTTGAGCCAGACCCCGGCCGGCTTGCGGCTCTGGCAGTTTTCCGATCCCTACATGCGTGTCCCGCAACTGGTGG TCGGCGAGCAGAAGGGCGCCGGCGCGGTGGAGCTGGAAAAGCTCGACAGCCAGACTCGCGTGGCGGTGCGCATGCCCAGCGCGGTGGCAGACTACCTGCG TGCGACTTACTCCAATCTCAATCTGCAGGGCGTGCCCCTGGAGCGCCAGGCCCTGCAATTGCTGCTCAGTCAGCAGGCGCGTTATGCGGTGATCGATGAG GCGCAGCTCAGTCGTTTGTCGGCGGAACCGGAATTCGCCGGCCTGGCGGTGGTGGGCGATATCGGCCTGCCGCAATTGCTGCGGGTGGCTACCCGGCGCG ACTGGCCCGAGCTGGCGGACATCGTGCAACGCGCCTTGCACGGTATCGCCGCCAAGGACCTGGAACAGCTGCACAATCGTTGGCTGCAGCCCAAGTATCC GCGGCTGAGCGAGTCCCGCGGTTTCTGGCAGAACCTCAGCCTGTTGCTGGCCGTGCTGCTGTTGGCGAGCATGGCCATCGTGATCTGGCAGCGCCGCCAG CAACAGGCGCTCGAGCAGCGGTTGCTGACCACCCGCGAGGACCTGGCCCGGCGCGAGGCCAGTGAAGAAGCCTTGCGCCTGACCCAGTTTTCCATCGACC AGAGCACGGTGGGCATTCTCTGGGTCAACTGGGACAGCCATGTACGCTACGCCAACCGCGCGGCCGAAAGCATGCTGGGTTATGCGTCGGGGGCGGTGGT CGACCGGCCGTTGAGCGACTTCGAACCCAACCTGCACATGGACCGCTGGCTTGGCCTGTGGAAGCGCGCGCGTGCCAGCGAGGACGCGCCGCCCAGCTTC GAGACCCAGTGTGTCCGCGCCGACGGCAGCATCCTGCCGGCCGATGTGTCGCTGAGCTTTCTGCGCTTTCGCGATGGCGAGTACCTGGTGGTTTACCTCA CTGACGTCACCGAGCGTCGTCGCGCCCTGGCCGCCCTGCAGGAAAGCGAAGCGCGGTTGCAGGGGATCGCCGCCAACGTACCGGGGCTAGTGTTCCGCCT GGAACGGGCGCCGGTGACCGGGCAGATCGATTTCGCCTACATCAGCGAAGGCAGCGAGAGCCTGGTGGGTTACTCCCCAGCGACCCTCAGCCACCGCGAC ATAGGGCTGCGCAGCCTGGTGCACCCGGAAGATCGGGCCAGTTACCACCAGACCCAGGACCATGCCCTGGACACCGACAGCGACTGGTCCTGGCAGGGGC GGATCCTGACCCGCCAGGGCGAACAGCGCTGGGCGGAAATCAAGGCCATCACCCGCCAGCTCGAGGACGGCGCCTATGTCTGGGACGGTATCGTCTGGGA CATCAGCGAAAGCAAGCGCATCGAACTGGAACTGGCCAGCTCGCGCGAGCAACTGCGCGAGCTATCGGCGCACCTGGAAAGCGTGCGCGAAGAGGAAAAG GCTCGTATCGCCCGGGAAGTGCACGACGAGTTGGGGCAGATGCTCACGGTGCTCAAGCTGGAGACCTCGATGTGCGAGCTGGCCTACGCGCAACTCGATC CGGGGCTGCACGAACGCCTGAACAGTATGAAGCGCCTGATCGCCCAGCTGTTCCAGCTGGTGCGCGATGTGGCCACGGCCTTGCGCCCGCCGATTCTCGA TGCCGGCATCGCCTCGGCCATCGAGTGGCAGGCGCGGCGTTTCGAGGCGCGCACGCAGATTCCTTGCCTGGTGCAGGTGCCCGACAACCTGCCGGTGCTC AGCGACGCCAAGGCCATCGGTCTGTTCCGCATCCTCCAGGAGGCGCTGACCAACGTGATGCGCCATGCACAGGCGCATACTGTCGAACTGACCCTGAGCC TCGAGCACAATCAGCTGTGCATGACCATCAGCGACGACGGCCAGGGTTTCGTGGTCGAGGCCGGGCGGCCGACGTCCTTCGGTCTGGTGGGCATGCGCGA GCGGGTGCTGATCATGGGCGGCAGCCTGACCCTGGACAGTCAGCTGGGCGAGGGCACCACCCTGAGCGTTACTGTGCCGCTGGACCTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCGAGCAGACTCGCCGCTGCAGAGATCATCACTAATAAGAAGAGGTACGAGCTGTGATCCGTGTACTGGTAGCCGAAGACCACACCATCGTTCGCGAA GGCATCAAGCAGTTGATCGGCCTGGCCAAGGACCTGACGGTGGTGGGGGAGGCGAGCAATGGCGAGCAGTTGCTGGAAACCCTGCGCCACGTGCCTTGCG AGGTGGTGCTGCTGGATATTTCCATGCCTGGCGTCAACGGCCTGGAGGCGATCCCGCGGATCCGCGCGCTGAACAATCCACCGGCGATCCTGGTGCTGTC GATGCACGACGAAGCGCAGATGGCGGCCCGGGCGCTGAAAGTGGGAGCGGCCGGTTATGCCACCAAGGACAGCGCCCCGGCGCTGCTGCTGACGGCGATT CGCAAGGTGGCGGCAGGCGGGCGTTATATCGACCCGGAACTGGCCGACCGGATGGTTTTCGAAGTCGGCCTGACGGATACCCGGCCCCTGCATTCCCTGC
Amino Acid Sequence
>sensor histidine kinase
MRFRCLLVIGCICLPLMAWAVPAPHIAQAQWSPAQQQWLEQHRELRVGVVLQAPYAQYDRRLQRLSGANIELMQWLAQAMKVELSWRNFADQAQLEAAVR AGEVDMAPGLSQTPAGLRLWQFSDPYMRVPQLVVGEQKGAGAVELEKLDSQTRVAVRMPSAVADYLRATYSNLNLQGVPLERQALQLLLSQQARYAVIDE AQLSRLSAEPEFAGLAVVGDIGLPQLLRVATRRDWPELADIVQRALHGIAAKDLEQLHNRWLQPKYPRLSESRGFWQNLSLLLAVLLLASMAIVIWQRRQ QQALEQRLLTTREDLARREASEEALRLTQFSIDQSTVGILWVNWDSHVRYANRAAESMLGYASGAVVDRPLSDFEPNLHMDRWLGLWKRARASEDAPPSF ETQCVRADGSILPADVSLSFLRFRDGEYLVVYLTDVTERRRALAALQESEARLQGIAANVPGLVFRLERAPVTGQIDFAYISEGSESLVGYSPATLSHRD IGLRSLVHPEDRASYHQTQDHALDTDSDWSWQGRILTRQGEQRWAEIKAITRQLEDGAYVWDGIVWDISESKRIELELASSREQLRELSAHLESVREEEK ARIAREVHDELGQMLTVLKLETSMCELAYAQLDPGLHERLNSMKRLIAQLFQLVRDVATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPVL SDAKAIGLFRILQEALTNVMRHAQAHTVELTLSLEHNQLCMTISDDGQGFVVEAGRPTSFGLVGMRERVLIMGGSLTLDSQLGEGTTLSVTVPLDL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site