Pseudomonas chlororaphis O6, PchlO6_5299 (phuT)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCGACAGGGGATGGCCGTCAGGGACTGCCCGGCACAAGGGCCGGCCACGCATTCGCCGTTTTCGATCAGAAACAGCGCGCCGTGGGTGGCGCACTGAA TCAGGCTGGCGCTGGGATCGAGGAACTGATCGGGCTGCCACTCCAGGGCGACCCCGCGATGGGGGCAGCGGTTGGTGTAGACGTAGACCTTTCGATCGCG GCGCACCGCGAAAAGTGGCTGGCCTTCGAGGTTGAAACCTCGGCTGGAAGCCTCCGGCAGATCGCCGGGGGGGCAAAGAAACTTCATGTCTATCCTCGGT AACCGACGGCTCTGGGCTCAGGCTGTCACAGTTTTCCTGCGGGCGCTTGATGAAACATGTCTGTGCTTGACGGTCAAATGCAAACAATTATCAAATGGCC GCTTCGCCTGTGGGGCGCTTGCTCATTTCGATGCCTGGGTTGCAGGGCATGTCACATGCACGGCGGCTTCCGTGGGCCCACTCTCTGAAGGAATACCTTT
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| DNA Sequence for Gene |
>PchlO6_5299
|phuT
ATGCGTTCGAGTGCCCGCGCAATCGCGCTCTGTGTCGGACTTCTGGCCAGCCATGCCGCTGTGGCGGCCGAGTTGCCACAACGCTGGGTGAGCGCCGGTG GCGCCTTGTCCGAATGGGTGAGCGCGCTGGGCGCCGAGTCGAAGCTGGTGGGCGTGGACACCACCAGCCAGCATCCCGAATCCCTGAAGAAGCTGCCGAG CATCGGTTATCAGCGCCAGCTGTCGGCGGAAGGCATTCTCAGCCTGCGTCCGCAGATTCTGCTGGGCACCGAAGAGATGGGGCCACCACCGGTGCTCTCG CAGGTGCGCAGCGCCGGGGTGCAGGTCGAGCTGTTCTCGGCCCAGGCCGACCTGCCGACCCTACAGGGCAATCTGCAGCATCTGGGCAAGTTGCTGGGCA GCGAAGACAAGGCGACGCAACTGTTCGAGCAATATAAGCAGCAACTGGATCAGCAGCAGGCCTGGGTCAGCCAGGCCCGGAAAAAGCAGGCGCCGCCGGG TGTGCTGCTGTTGCTCGGGCATGCGGGTGGCAAACCTCTGATTGCCGGCAAGGACACCGCTGCCGACTGGCTATTGCAGCAGGCGGGTGGACGCAATCTT GCCACCCACACGGGGTACAAACCCTTTTCCACGGAGTCGTTGGCCGAACTCAACCCCGAGGTGCTGGTGTTTGCCGATCGCAGCCTGAGCGGTGAGGCGG CCCGCGCCGCGCTGTTCAAGGAAAACCCGATTCTCGCCTCCAGCGGTGCGGCGAAGGCCGGCCGGGTCTTCGAGATTGATCCGACCTTGCTGGTGGGAGG CCTGGGGCCACGCTTGCCACAGAACCTGAAAAGGCTGTCAGCCGATTTCTACCCAGCCGCGCCGGGCCAGGCCAGCACCGCCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCTTTGCTTAAACCCCGTGCGTTGTTCATTGGCCTGAGCCTGCTGTGCCTGTTGGCGATCTGGTTGTCCCTGGCGCTCGGGCCGGTCAGCCTGCCGCT GTTCGATACCCTGCGTGCCGCCCTGCGTTTGCTGGGCTTGCCCATTGAGGGGCAGGGGCTGGAGCAGGCCGAACTGATCCTCGGGCAGATTCGCTTGCCT CGCACCTTGCTGGGGTTGGCGGTAGGGGGCGTCTTGGCGCTGTCCGGCGTGGCGATGCAAGGGCTGTTTCGCAATCCCTTGGCCGACCCGGGGCTGGTAG GCGTCTCGAGTGGCGCGGCGCTGGGCGCGGCCTTTGCCATCGTCGGTGGCTCGCTGCTGGGCGGCGTGCCGGAAGCGATCGGTCCTTACCTGCTGTCGTT CTGTGCCTTTCTCGGTGGTCTGGTGGTGGCGTGGCTGGTCTACCGCCTGGGACGGCGCAACGGCCAGACCCATGTGGCGACCATGCTGTTGGCCGGGATT
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| Amino Acid Sequence |
>hemin ABC transporter, periplasmic hemin-binding protein PhuT
MRSSARAIALCVGLLASHAAVAAELPQRWVSAGGALSEWVSALGAESKLVGVDTTSQHPESLKKLPSIGYQRQLSAEGILSLRPQILLGTEEMGPPPVLS QVRSAGVQVELFSAQADLPTLQGNLQHLGKLLGSEDKATQLFEQYKQQLDQQQAWVSQARKKQAPPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGRNL ATHTGYKPFSTESLAELNPEVLVFADRSLSGEAARAALFKENPILASSGAAKAGRVFEIDPTLLVGGLGPRLPQNLKRLSADFYPAAPGQASTAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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