Pseudomonas chlororaphis O6, PchlO6_4870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGCCCTGGCCAGCACCATCGGCGCCGGCAACCCGCTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCTTACTACATCGACTA CCGCAACCTGCGTCCCAAGTACGTCGAAGCGTTCTGGAACCTGGTCAACTGGAAATTCGTGGCCGAGCAGTTCGAAGGCAAGACCTTCGTCGCCTAAGCC CGTTTGCAGTCAAAAAAACCCGGCATTGCCGGGTTTTTTCGTTTTACCGGCAAGCGGCCGGCTTGCCGCGCCAGCCCGGCGCGCTAACATCCGCTCAGGT AAAAAATCGCCGCCGTCCCTCAAGTTGCAAGGCTTGGCTACCGACATATAACCGATAAGCGCGGATAGGCTGGCTACCGGCATTCCAGCCAAGCCTACAG GTGAAATATCCTGGGCCTGATTGTCCCTTTGACTGCCATCACGGGATTGCCAATACTCATGGCAACTTGACGCTACACGCACGGAACAAGGAATAACCCT
DNA Sequence for Gene
>PchlO6_4870
TTGAAGCTGGAACTCAAAAACAGCTTGTCGGTGAAGTTGCTCCGGGTTGTGCTGCTGTCGGCACTGATAGTGGGCGTAGTTCTGAGCTGCGCACAAATCG TCTTCGATGCTTACAAGACTCGGCAGGCGGTCGCTAATGATGCCCAGCGCATTCTCGACATGTTTCGCGACCCCTCGACCCAGGCCGTTTACAGCCTGGA CCGCGAAATGGGCATGCAAGTCATCGAAGGCCTGTTCCAGGACGATGCCGTGCGCATGGCCTCCATTGGCCATCCCAACGAAACCATGCTCGCGGAAAAA ACCCGTGAGTTGCAGACATCTCCCAGCCGCTGGCTGACCGACCTGATCCTCGGCAAGGAGCGCACCTTCACCACCCAGCTGGTGGGTCGTGGCCCCTACA GCGAATACTACGGCGACCTGAGCATTACCCTCGACACGGCCACCTACGGCCAGGGCTTCATCGTCAGTTCGGTGATCATTTTCATTTCCGGCGTATTGCG TGCCCTGGCCATGGGCCTGGTGCTGTATCTGGTTTACCACTGGCTGCTGACCAAGCCGCTGTCGCGGATCATCGAGCATCTGACCACCATCAATCCGGAC CGCCCCAGCGAGCATCAGATTCCCTTGCTCAAGGGCCACGAGCGAAACGAGCTGGGGATCTGGATCAATACCGCCAACCAGTTGCTGGCGTCGATCGAGC GCAACACGCACCTGCGCCATGAAGCGGAAAACAGCCTGCTGCGCATGGCCCAGTACGACTTCCTCACTGGCCTGCCCAACCGCCAGCAGTTGCAGCAGCA ACTGGACAAGATCCTGATCGATGCCGGCCGCCTGCAACGCCGGGTCGCGGTGCTCTGTGTCGGCCTCGACGACTTCAAGGGCATCAACGAACAGTTCAGC TACCAGACCGGCGACCAGTTGCTACTGGCCCTGGCCGATCGCCTGCGGGCCCACAGCGGTCGCCTGGGCGCCCTCGCCCGCCTCGGCGGCGACCAGTTCG CCCTGGTCCAGGCCGACATCGAACAACCCTACGAAGCCGCCGAGCTGGCGCAGAGCATTCTCGACGACCTGGAAGCGCCGTTCGCCCTCGACCATCAGGA AATCCGCCTGCGCGCCACCATCGGCATCACCCTGTTCCCGGAAGACGGCGACAGCACCGAAAAGCTGCTGCAGAAAGCCGAGCAGACCATGACCCTGGCC AAGAGCCGGTCGCGCAACCGTTATCAGTTCTACATCGCCAGTGTCGACAGCGAGATGCGCCGGCGCCGCGAACTGGAGAAGGACCTGCGCGAAGCCCTGA CCCGCCAGCAGTTCCACCTGGTCTACCAGCCGCAGATCAGCTACCGCGATCATCGGGTGGTCGGGGTCGAAGCGCTGCTGCGCTGGCAGCATCCGGAACA CGGCTTCGTCCCGCCGGACCTGTTCATCCCCCTGGCCGAGCAGAACGGCACCATCATCGCCATCGGCGAATGGGTGCTGGACCAGGCCTGCCGCCAGTTG CGCGAATGGCATGACCTGGGCTTCAGCGACCTGCGCATGGCGGTCAACCTGTCCACCGTGCAACTGCACCACGCCGAACTGCCACGGGTGGTCAACAACC TGCTGCAGATCTACCGCCTGCCGCCGCGCAGCCTGGAGCTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCAGCACCGCCGCCCAGCACCTGCTGAG CCTGCGCCGCTCGGGTGCGCTGATCGCCATCGACGACTTCGGCACCGGCTACTCGTCCCTGAGCTACCTCAAGAGCCTGCCGCTGGACAAGATCAAGATC GACAAGAGCTTCGTCCAGGACCTGCTGGACGACGACGACGATGCGACCATCGTGCGGGCGATCATCCAGCTGGGCAAAAGCCTGGGCATGCAGGTGATCG CCGAGGGCGTGGAAACCGCCGAGCAGGAGGCCTACATCATCTCCGAAGGCTGCCACGAAGGTCAGGGTTATCACTACAGCAAACCCCTGCCGGCACGGGA GCTGAGCGCCTACCTGAAACAGGCCCAGCGCAGCAACGCGGCCATCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCCCGATTGCGCGCCTAAGCCTGATCCAGCGCAATCGCTTCCTGAATAGGAAATATTTACAACCACAACCCTTTACACATAATGCAAATCTTTCGCAT TATGTCGCAGTTTTGCGCGCCCCTCGCGCCAGTCCACCCCTCTCTCGAAGCAGGATGTTCGCCATGATTCGTATGCCTCTGGCTACCGCCAGTCTGTTGG CCATCGCTATTTCCCTCGCCGGTTGCGGCGAAGGCAAAGACAAGGCTGCCGCGCCGCAAGCCGCTGCTCCAGCCGCCAGCACCGCAGCCCCGGCCACCGC TCCTGCGGCCGGCAAGGTCGATGAAGCGGCGGCCAAGGCGGTTGTCGCGCATTACGCCGACATGGTCTTCGCCGTATACAGCGATGCCGAATCCACCGCG AAGACCCTGCAGACCGCAATCGACGCCTTCCTCGCCAAACCCAACGCCGACACCCTGAAAGCCGCCAAGGCTGCCTGGGTCGCCGCTCGCGTGCCTTACC
Amino Acid Sequence
>diguanylate cyclase
MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVANDAQRILDMFRDPSTQAVYSLDREMGMQVIEGLFQDDAVRMASIGHPNETMLAEK TRELQTSPSRWLTDLILGKERTFTTQLVGRGPYSEYYGDLSITLDTATYGQGFIVSSVIIFISGVLRALAMGLVLYLVYHWLLTKPLSRIIEHLTTINPD RPSEHQIPLLKGHERNELGIWINTANQLLASIERNTHLRHEAENSLLRMAQYDFLTGLPNRQQLQQQLDKILIDAGRLQRRVAVLCVGLDDFKGINEQFS YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAPFALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLA KSRSRNRYQFYIASVDSEMRRRRELEKDLREALTRQQFHLVYQPQISYRDHRVVGVEALLRWQHPEHGFVPPDLFIPLAEQNGTIIAIGEWVLDQACRQL REWHDLGFSDLRMAVNLSTVQLHHAELPRVVNNLLQIYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIISEGCHEGQGYHYSKPLPARELSAYLKQAQRSNAAIL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site