Pseudomonas chlororaphis O6, PchlO6_4664

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATGTTGATGCGCTCGTCGATGTTCTGCTCCAGCAGCAACTGGATCAGCTCGCGCTTGAGCACCATGACCTGGCCCTCGGCGGTGGCCCAGACGAATTC GCTGGCGGGGGTGATGGCGTCGTCGGCGACGTCCATGCCGAAGGAGTCTTCGCTGAAGCGCACGATGTGCTGGCCGCTCTTGCGGTTGAACCCGACAAAA CCCTTGAGCTGGTCGGCGGCCTGGCAGATGAGTTCGGATGTGATGCGCATGGTAAACCTCACTGAGTGTCCCGCAGGACAGGTGATCGATGGTTTACACG CAGGGCAAGAGTGGACTTGTTCCAGGGCTTCCCTCTGACGGGGAAACTTCAGGGCGCAAGCGTACTGCAAAGCACCCCACAAAAGCGTCGGGAAATTTGC CGCAGGTGCAGATTTATGTCGGTTTCGCGATAGCACAACGGCCATTCAATTGTTAAAAGGTAGTCCTTTGAAAACCGCCCTCCACGAAAGGACCTCGACC
DNA Sequence for Gene
>PchlO6_4664
ATGCCTGCCACCTTCACCAAAAGCGCCCTGATGCTGAGCCTGATGCTTGGCCTGGGCCAGGCACAGGCCGCCAGCCCAAGCCCCACCGCACTGGCTGTCA GCCAAGGCATTCCACACCCGGCAGTGATCGCTCACCGGGGCGCGTCCTTCGATGCACCGGAGTCCACCGCCGCGGCCTACAAGCTGGCCCGCGACCTGGG TGCCGACTACCTGGAAATGGACCTGCAACGCAGCAAGGACGGCGTGCTGTTCGCCCTGCATGACAACAACCTGCAACGCACCACCGACGTCGCCAGCAAG TTTCCCGAGCGCAAGGACAGCCCGGCCAACGCCTTCACCATGGCCGAACTGAAAACCCTCGACGCCGGCAGCTGGTTCAACCAGGCCTATCCCGACCGCG CCCGTGCGAGCTACGTCGGCCTGAAGATCCTGACCCTCGACGAAATCATCGACATCGCCCAGAGCAACCCGCAGCACAAGCCCGGCCTGTACATCGAGAC CAAGGAGCCCCAGCAGTTCCCCGGCATCGAGCACGACCTCAAGGAAAAACTCCAGGACCGCGGCTGGCTCAGCCCGGCTGGCTCCAAGCTGGCGAAAAGC GACCTGGCGGTAGGCCAGGGCAAAGGCAAGGTGGTACTGCAGACCTTCGAGAAGAGCAGCCTGGAACTGCTGCAGAAAGAAATGCCCAAGGTGCCGAAGA TCCTCCTGCTGTGGATCGGTGAAGGCGGCATGCAGCCCAAGTCCGACGTGACCTTCGCCAACAGCGGCGAGAAGGACAAGGCAGCCTACTACGCCAAGCA GGAACCCAAGGACAAGGCCGAGTTCGAGCAGTGGGTCAGCTACGCCAAGGCCCAGGGCGCCATCGGCACCGGCCCGTCGGCAGCACTGACCAATGGCGGC GACCAGAGTTACTTCGACCTGGTGCAACCCTGGATGAACCAGTTCACCCACGACCAGGGCCTGCTGGTGCACGTCTACACCATCGATGAGCCGGTGGACT TCAAGAAGGTCCTGGACTCCGGTGTCGACGGCATCTTCACCAACCGCGCCTCGGAGCTGCTCAAGTACGCCAAGCGTCCGGCCAGCGGCAGCGTGAGCCA GCTGCTCGAGGCCAACGGCTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGTCGCCGTGCGCACGCCCGAGTGGACAGGCCAGCTGTGGCTCGGGCGTGACTACGGACTGATCCAGGGCGAGCTGGGGCGCACCGCGCCCCACGCC CACTACGCCCATCAACTGATCCTCGCCCCCGCTGCGCCGGTCACCGTCAGCCTCGACGGCCAGCCCTGCACCGCCCGCCACGTGTTCATCCCGGCCATGC AACGGCATGCCATCCTCGACGCGCCCGGGACCCTGTTCACCCTCTACGCCGAACCGCTGACGATTGACGCCCAGGCCCTGCAACACAGCCTGCTGGGTGT CGAGCTGACACTGCCGGCGCTGGCCGAGGCGCTGCGGCATTGCCCGCGCCGAACCTTGCAAGACCGGCGGATCGAAAAGGCCCTGGCCGCCCTCGACAAA CAATTGGCCGGCAAGGTCTCGGCCAGCGCCCTGGCGGCCCATGCGCACCTGTCCCTGAGCCAGCTCGAACGGCTGTTCAGTGGCCAGCTCGGGTTGCCGG
Amino Acid Sequence
>glycerophosphoryl diester phosphodiesterase
MPATFTKSALMLSLMLGLGQAQAASPSPTALAVSQGIPHPAVIAHRGASFDAPESTAAAYKLARDLGADYLEMDLQRSKDGVLFALHDNNLQRTTDVASK FPERKDSPANAFTMAELKTLDAGSWFNQAYPDRARASYVGLKILTLDEIIDIAQSNPQHKPGLYIETKEPQQFPGIEHDLKEKLQDRGWLSPAGSKLAKS DLAVGQGKGKVVLQTFEKSSLELLQKEMPKVPKILLLWIGEGGMQPKSDVTFANSGEKDKAAYYAKQEPKDKAEFEQWVSYAKAQGAIGTGPSAALTNGG DQSYFDLVQPWMNQFTHDQGLLVHVYTIDEPVDFKKVLDSGVDGIFTNRASELLKYAKRPASGSVSQLLEANGY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site