Pseudomonas chlororaphis O6, PchlO6_4389 (aroF_2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAACGGTTGCACACTATCAGCCTCGGCGGCATGGCTTGCAATTATCACCGCGCCTGGCGCCGCGGCACTGCACTGGAAATCTGCATGCCCACTCTGGGTG AAAACGCCCGCTACAACGGCTATGTGGCCTGGTGCCTGCGACGCAAGCGTGGCTACCTGGTGGGGATCGCCTTCATCGACGAACAGACCCTGTTCCGTGC CCGAATGAGTGAGCAGGTGTGCCAGATCGCCCACTACTGCCACCTGCATGAGCCCCAGGCCGAGCAGCGACAGATCGAAACCCTGGCCCAGCAATGGGTC GAACAGCACGCCGCCGAGTTCTCCCACGACCGGGTTCATCAGGCTTTTATGCAGCCAGCGCTGGATTAAACCCGTCTCTGCCCATTGTCGAGCCCCGGTG TAACGCGCTAAGGTTCGGCTCCCCGACGCGCTTAAATCCGCTGTGCACCGCCGCGCGGGGATCGCTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
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| DNA Sequence for Gene |
>PchlO6_4389
|aroF_2
ATGGCTGATTTACCGATCAACGACCTTAACGTCGCCTCCAACGAAACCCTGATCACTCCCGACCAGCTCAAGCGCGACATTCCGCTGAGCGACGCCGCCC TGCGCACCGTGACCAAGGGTCGCGAAGTGATCCGCAATATTCTCGACGGCACCGACCACCGTCTGTTCGTCGTCATCGGCCCTTGCTCGATCCACGACAT CAAGGCTGCCCACGAGTATGCCGAGCGCCTGAAAGTCCTGGCCGCCGAAGTCTCCGACACCCTTTACCTGGTGATGCGCGTGTACTTCGAGAAACCACGG ACCACCGTTGGCTGGAAAGGCTTGATCAACGACCCGTACCTGGACGACTCGTTCAAGATCCAGGACGGTCTGCACATCGGTCGCCAGCTGCTGCTGGACC TGGCCGAGATGGGCCTGCCGACCGCCACCGAAGCGCTGGACCCGATCTCCCCGCAATACCTGCAGGACCTGATCAGCTGGTCGGCGATCGGTGCGCGTAC CACCGAATCCCAGACCCACCGCGAGATGGCTTCCGGCCTGTCTTCGGCAGTAGGTTTCAAGAACGGCACCGACGGCGGCCTGACCGTTGCCATCAATGCC CTGCAATCGGTTTCCAGCCCTCACCGTTTCCTCGGCATCAACCAGGAAGGTGGCGTATCCATCGTCACCACCAAGGGCAATGCCTACGGTCACGTGGTTC TGCGCGGAGGCAATGGCAAGCCGAACTATGACTCGGTCAGTGTCGCCCTCTGCGAGCAGGCGCTGAACAAGGCGAAGATCAAGCCGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGATCCGGCCTTGCAGCCACTGGTAATGGAGAACGTGGCCAACCAGATTCTCGAAGGCAACCAGTCGATCATCGGT CTGATGGTCGAAAGCCATCTGAACTGGGGCTGCCAGGCCATTCCCAAGGACCTGGCCGAACTGCAATACGGCGTGTCGATCACCGATGCCTGCATCGATT GGGAAAGCACCGAGAAAACCTTGCGCAGCATGCACGCCAAGCTCAAGGACGTCCTGCCTAAACGGGTTCGCACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCGTATCGCAGACACAAAAACGCCGGGCCAAGCCCGGCGTTTTTTTTGGTGTCCCCGCTCAGAGTTTCGCGGCGTGGCGCTGATGGCGCTCCATGTAG CGCTCCACATATGAGCACGACGGAATCACCGTGTACCCCATGCGATCAGCATATTCCAACGCCTGCTCGGTCAGTGCCGCAGCAATACCACGGCCGCGCA GCGCGTTAGGCACGAACGTCCGATAAATATCCAGGGTCTGCTTACCCAGGTCCATATAGGTCAGGTAGGCACGATGACCGTCCACATTGGTCTCGAATTG ATGACCAGCCTGGTCATGGTGGATGGACAACGCCTCGCTCATCACTACTCCTCGCGGGTCTTGGATTCTGACCCCTACCTTACCGATGTTTTTCCGGCGA AGGAACAACTACGCCACCCCGTGCCTGTCTGGACACCGAGCAGAGCCTGCCGCTCTCGCATGACCGAGCACGTATCAAATAGTAGGCACCATTGGCACCA
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPINDLNVASNETLITPDQLKRDIPLSDAALRTVTKGREVIRNILDGTDHRLFVVIGPCSIHDIKAAHEYAERLKVLAAEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVALCEQALNKAKIKPNIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQAIPKDLAELQYGVSITDACIDWESTEKTLRSMHAKLKDVLPKRVRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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