Pseudomonas chlororaphis O6, PchlO6_3856 (cobM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53790
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01465
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046026 precorrin-4 C11-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01465
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 111 232 5.3E-36
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 2 230 2.09E-67
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 1 109 5.3E-30
PANTHER PTHR45790 SIROHEME SYNTHASE-RELATED - - 2 230 1.3E-60
CDD cd11641 Precorrin-4_C11-MT IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase 6 228 1.75741E-119
NCBIfam TIGR01465 JCVI: precorrin-4 C(11)-methyltransferase IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase 3 247 9.8E-96
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 3 206 1.6E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.