Pseudomonas chlororaphis O6, PchlO6_3470 (hpaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTCAAGGACCCGATGCTCAACCAGTACCTGAGCACCTATTGCCGGGGCTCGGCGGGCATGGGCCACGAGGAGCGGATCAAGATCCTCAAGCTGCTGTGG GATGCGATCGGCACCGAGTTCGGCGGCCGCCACGAGCTGTACGAAATCAACTACGCCGGCAGCCAGGACGAAATCCGCATGCAGTGCCTGCGACATGCCC AGGCCAGCGGCTCGATGAAAACCATGACCGAATTGGTGGACAAATGCCTGGGCGACTACAATCTCGACGGCTGGACGGTGCCACACCTGACCAATCCGGA CGACATCAACATGCTCGACCGCATCCGCCAGTAACCACTGCCTCGCTTCTGTAGGAGCGAAGCTTGCTCGCGATAAGACGTGAACGATGACGCGCGGCAT CTGCGACTCCACGTTGGCTTGAGGTTTTTCGCGAGCAACCGAGCGTCGAGCGACGGCTCCTGCAAATACCGTGGTTCAATCCCGAGGAAAGGAATCTCTC
DNA Sequence for Gene
>PchlO6_3470 |hpaC
ATGACTCAACTTGATCCCAAGCAACAAGCCTTTCGCAACGCCATGGCGCACATGACCGCGGCGGTCAACGTCATCACCAGCAACGGCCCGGCCGGACGCT GCGGCATCACCGCCACCGCGGTCTGCTCGGTCACCGACAGCCCGCCCAGCCTGATGGTCTGCGTCAACCGCAACAGCGCCCTGAACCCGGTGTTCAAGCG CAACGGCCAGCTCTGCATCAACGTGCTCTGCGGCGAACACGAAGAAGTCGCCCGGCACTTCGCCGGCATGACCGGAGTGGAGATGGAACAGCGCTTCAGT CTGCACCCCTGGCGCGACGGCCAGGACGCCCTGCCGGTGCTCGACGGTGCCCTGGCCAGCCTGCAGGGACGGATCACCGAGGTGCAGGAAATCGGCACCC ACTCGGTGATGCTGGTGCAACTGGATGAGATCTGCGTAGGCGAACACGGCGACTCGCTGGTGTATTTCAGCCGTGGTTTCCACCGTTTGCAGCGGGCCGT CCAGGCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTTGATCAGCTGCTTTTCTGTAGGAGCGAGGCTTGCCCGCGATAGCCGCGCAGCGGCGATACACCCGCCAACGCGCGTTATCGTTGCAGATTTATCG CGAGCAAGCTTCGCTCCTACAGAAGCCAATTTCCCCCGCCAACGCCCCCCTTCATCCTGCATCTGTAGGATAGCGATCCCCCACCAACCCGACGATACTC GTGCCCAGGCCCTGCCCACGTCCCTGGACGTTCCGGTCCTTACTGACTCCGTGACGAAAACAATAAGAAAGTCGCACAGAGGAACACCCCCATGAGCCGT CATGAACATGGTCACGCCAGCCTGCTGCAAGCCTTCAGCTCGCTGACCCTGGAGTTGCAGCGCCTGGCGCAGCACAAGGACATCGAACATTTCCATGGCC ATGCGCTGAACCGCATCGGTCAGTTGCTGCCCTTCGACAGCGCCTGGTGGGGCCGCGCCGCGTTGATCGACGGCCTGCCGGAAGAACACAGCTCCTACCT
Amino Acid Sequence
>MFS transporter
MTQLDPKQQAFRNAMAHMTAAVNVITSNGPAGRCGITATAVCSVTDSPPSLMVCVNRNSALNPVFKRNGQLCINVLCGEHEEVARHFAGMTGVEMEQRFS LHPWRDGQDALPVLDGALASLQGRITEVQEIGTHSVMLVQLDEICVGEHGDSLVYFSRGFHRLQRAVQAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site