Pseudomonas chlororaphis O6, PchlO6_2808

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCAGCGGCGCTGGCGCAGCAGGTCGCCAGCCTGGATGACTGTGCCGCGCGGCTGTTCGAGGCCGGGCACAGCCCCGTATTCGGCCAGTGGCTGGGGC TGGCGGCGGAGGATTCGAGCGCTGCCGGCGAGCCAGGCGCCGGGTTCCAGGAGCGTGCGCAACAGCAGTTGCAGCGTTGCGACGCGCTGCTGCGCATCGG CGGCGCCTGCGCCAGTGCCGATGCCCTGGTCGCGATGGGCGAGCGCCTGGGCCTGCCGGTCTACCGTTCGCTGCAGGACATCCCGCGTTGCACTTCGGCC AGTTGAGTCAGCGCTCAATTGGCCGACGGTCTTGTATCGAAGTGTGTATCGGCCCGGCGCTGATACACCTGCTTGTCCTGGCGCCGGTTGCGCACACAAC CTGGATACACCCCGAGGATTAACTACGTCCACCCGCCAGCACCGAGCTTCTCGGTGTCGGTGGCGGGAACCGTTAATCAATCCATCGAAGGGGTATCAGC
DNA Sequence for Gene
>PchlO6_2808
ATGTTCAAACTCTCCAACGTTTCCAACGTCGCGCTCGGCCTGGCACTGGTCGGCGGCCTGGGCCTGTCCACCGCCGCTTCGGCGCTGAGCATGACCGAGC TGTCCCAGGGCTACACCCTGGCCGCGGCCGACGGGGTCAAGACCTCCACCGAAGGCAAGTGCGGCGAAGACAAGTTCGCCAAGACCGACACTAACCACGA CGGCAAGGTCTCCCGCGAGGAGTTCATCGCCGCCGCCCCCGAGCGCGCCGCCGAGTTCGACAAGATCGACGCCAACCACGATGGCGCCATCAGCCTGAGC GAAGCCAAGCAGTACCTGGCGGCCAAGGCCGGTTCGGCCGAAGGCAAATGTGGCGAAGGCAAATGCGGTGCGGCGATCGAGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGACGGTGGCGGGGGGCACTCAGGTGCCCCCCGTTTTTTTCCGGGGCAACCAGGAGACGGACCCATGCCTCCCTCAATACCACCCTGCAACATCCCATC ATCCGCCCAAGCCCCACGGCTGCCCGTTTCGGCAGCCGCGGGGCTTGGCTTGCGTCGTGCCTTGCTCGACGCATTGAATACGGCGCCTGCGGGCGCTTTT GATTTTCTGGAGCTGGCGCCGGAAAACTGGATCGGCCTCGGCGGTGCCCATGGCGCCGCGTTGCGCGCCCTGGCCGAGCGTTACCCGTTGAGCTGCCACG GGCTGTCGTTGTCCCTCGGTGGCCCGGCGCCGCTGGACCTGGGGTTCCTGCGGGAAGTCCGGCAGTTCCTCGAGCGCTTCAAGGTGCCGCTGTACAGCGA ACACCTGAGCTACTGCGGCGACGACGGGCACCTCTACGACCTGCTGCCGCTGCCGTTCACCGAAGAGGCGGTGCGCCATGTCGCGGCGCGCATTCGCCAG
Amino Acid Sequence
>calcium-binding protein
MFKLSNVSNVALGLALVGGLGLSTAASALSMTELSQGYTLAAADGVKTSTEGKCGEDKFAKTDTNHDGKVSREEFIAAAPERAAEFDKIDANHDGAISLS EAKQYLAAKAGSAEGKCGEGKCGAAIES
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site