Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGACTCCCACGTGGCGATCCCCAACGACGAGCGCAGCCTCGACGAGATTCGCGCCAAGGACCTGGTGCCTTTCGCGCGCCTGAGCAAGCAATTGGCGG CGGTGATGCCGGCCCACGTTATCTACCCTCAGGTCGATGCCCAGCCGGCCGGGTTCTCCCGCCGTTGGCTGCAAGAGATCCTGCGCGGTGAATTGCAATT CGACGGCGTCATCTTCAGTGACGACCTGTCGATGGCCGGTGCGCACGTGGTTGGCGATGCCGCGAGCCGGATCGAAGCGGCGCTGTCGGCCGGTTGCGAC ATGGGCCTGGTGTGTAACGACCGGGCGGCGGCCGAGCTGGCCTTGAGCGCGGCCCAGCGTCTGAAAGTGACACCGTCGGGGCGTATTGCGCGGATGCGCG GCCAGGCGTTCGCTTGCACCGACTATCGCCAGGATCCGCGCTGGCTGGCGGCGCTCGGCGCACTCAAGGATGCCCAGCTGATCGATTAAGGACTTTTGCG
|
|
DNA Sequence for Gene |
>PchlO6_2067
|mtnP_1
ATGACGGTTTACGCGATTATCGGCGGTACCGGCCTGACCCGGCTCGAAGGCTTGAGCATTCACCAAACCTTGCCCCTGGACACGCCTTATGGCGCTCCGT CGGCGGATATCCAGAAGGGTGAATACGCCGGGCGCGAGGTGTTGTTTCTGGCGCGCCACGGTCATCCGCATCGCTTGCCGCCGCATCAGGTGAACTATCG GGCCAACCTCTGGGCGTTGAAGCAGGCTGGCGCCGAGGCGGTCCTGGCGGTCAACGCGGTGGGTGGCATTCATCCGGCGATGGGCTCCGGGCATTTCTGC GTGCCGCATCAACTGATCGACTACACCAGCGGTCGCGAGCACACCTACTTTGCCGACGACCTGGAGCAGGTCACCCACATCGACTTCAGCTATCCCTACA GCGAGTCGCTGCGCCAGCAGTTGATTGTCGCGCTGGAGGCCGAGGGCTGTGAATTCAGCAGCCAGGGTGTGTACGCCTGCACCCAGGGCCCGCGCCTGGA GACCGTGGCGGAGATCGCCCGCCTGGAGCGTGACGGCTGCGACATCGTCGGCATGACCGGCATGCCGGAAGCGGCGCTGGCCCGTGAGCTGGAGCTGGAC TACGCCTGCCTGGCGCTGGTGGTGAACCCGGCGGCGGGCAAGTCCGCTGCGGTGATTACCATGGCCGAGATCGAACAGGCGTTGCAGGACGGCATGGGCA AGGTGAAGTCGACGCTGGCGCGGGTCCTCGCGGCAAACCTGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCGCTGGTAAAGGCTGCGATCGAGCGCGTAGCGCTCGCAAAACCTGAATCCGCGTATTCACGCCTGCTGCGCAGCCGATCACAGGCTGCGCCAGCGGCTA CAGATCAGCGTCCGCCTTTCTTGTCGGGCAGCGGGGCGAAGAGGGCTTCGATGTCTTCGCTCTGCAGCTTCCAGTCGCCGGCCTTGCGCCCATCCAGCAC GCCCGCCGCCAGGTCGGACTTCTCCTGTTGCAGGTGCTGGATTTTCTCTTCCACCGTGCCGCGGGCAATCAACTTGTAGACGAACACCGGCTTCTCCTGG CCGATCCGATAGGCGCGGTCGGTGGCCTGGTTTTCCGTGGCCGGGTTCCACCAGGGGTCGTAGTGGATCACGGTGTCAGCCTCGGTCAGGTTGAGGCCGA CGCCGCCGGCTTTCAGGCTGATCAGGAAGATTTGCAGCTTGCCGCTCTGGAAGTCCCTGACCGGCGTGCGGCGATCGCGGGTCTGCCCGGTCAGCAGGGC
|
|
Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTRLEGLSIHQTLPLDTPYGAPSADIQKGEYAGREVLFLARHGHPHRLPPHQVNYRANLWALKQAGAEAVLAVNAVGGIHPAMGSGHFC VPHQLIDYTSGREHTYFADDLEQVTHIDFSYPYSESLRQQLIVALEAEGCEFSSQGVYACTQGPRLETVAEIARLERDGCDIVGMTGMPEAALARELELD YACLALVVNPAAGKSAAVITMAEIEQALQDGMGKVKSTLARVLAANL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|