Pseudomonas chlororaphis O6, PchlO6_1749 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGCTGCAGGCGCTGCTGGCCGAACAGGTGCCGGTGCGCGATATCCGCAGCATTGCCGAAGCCATCGCGAACAATGCCGCCAAGAGTCAAGATACTG CCGCTTTGGTGGCCGCGGTGCGTGTCGGATTGTCGCGCGCCATCGTGCAAAGCATTGTAGGGACTGAGTCCGAGCTGCCTGTGATCACCTTGGAGCCCAG GTTGGAACAGATTTTGCTCAATAGTCTGCAGAAGGCAGGACAAGGCTCGGAAGAGGGTGTTCTGTTGGAGCCAAGCATGGCTGAGAAGCTGCAGCGTTCG TTGATCGAAGCCGCGCAGCGCCAGGAAATGCAAGGTCAACCGGTGATTCTGTTGGTAGCCGGTCCGGTCCGCGCGATGCTCTCGCGGTTTGGACGCCTGG CAGTCCCGGGCTTGCACGTGTTGGCTTACCAGGAAATCCCTGACAACAAGCAAGTGACCATCGTTGCGACAGTAGGGCCCAACGGCTGAGGTAGTGGGTT
|
|
| DNA Sequence for Gene |
>PchlO6_1749
|flhF
ATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTTCGTGATGAGCTGGGCGCCGACGCCGCCATCATTGGCAATCGCCGCA TCGCCGGCGGTGTCGAGCTGACGGCTGCCCTGGATTACAAGCTGTCGGCGCTGGCGCCTCGGGTTCCGAACATGGAGCTCGAGGACGAACTGCGCAAGAC TCAGTCGCGCATCGTCACCGCCCAGGCCGAACTGAGCCTGCGTGGCGATGGCGACGGCAGCACCAATCGCCAGCTGTTCGCCGGCCTGCCGCTGACCGCC GCCGAGCCGCTGATCGAACCGACGTTCAACGAGCCCCATCGCCCGGCCCCGGTGGCCGCCGCGCCGGCTGTCGATCAGCGGGCACTGGACTCGATGCGTT TTGAACTCAACGGCCTGCGCGAGCTGCTGGAAGTCCAGCTCGGCTCCCTGGCCTGGAGCCAGCTGCAAGGCAGCCGGCCCGAGCAGGCCAACCTGTGGCG GCGCCTGCAGCGTATCGGTTTGTCCGGTCCGCTGGCCCGCGACCTGCTGGCGCTGATCACAGAAATCGACGAGCCCCGCCAGGCCTGGCGCATGCTCCTG GCCCACCTGGCGCGGATGATCGTGACCCCGGAAGTCGAGCCGTTGGAAGAGGGCGGTGTGATCGCCATGGTCGGCCCTGCCGGCATGGGCAAGACCACCA CCCTGGCCAAGCTGGCGGCCCGTTACGTGCTCAAGTACGGCGCGCAGAACATCGCGCTGGTGAGCATGGACAGCTACCGCATCGGCGCCCAGGAGCAGCT CAAGACCCTGGGCCGGATCCTCAATGTCTCGGTGACCCATGTCGATCCGGGCCAATCCCTGGCGCAAGCCCTCGATCCGCTGCTGCGCAAACGCGTGGTG CTGATCGACACCGCCGGCCTGCAAGCCAGCGACCCGGCCCTGCGCATGCAACTGGAAAGTCTGGCCGGACGCGGGATCCGGGCAAAAAATTATCTGGTAT TGGCAACCACCAGCCAGAAACAGGTTCTAACCGCCGCGTACCACAGCTACAAGCGTTGCGGGCTGGCCGGCTGCATCCTGACTAAACTGGATGAAACCGC CAGCCTTGGTGAGGTGTTGAGCCTGGCGATCAGTCACGAACTCCCCGTTGCCTATCTGACCGATGGCCCACGGATTCCGGACGATTTGCACTTGCCACGC CGTCATCAGCTGGTCAGTCGTGCGGTGAGCGTGCAGATGCAGGAAGAACCCAGCGAAGAAGCCATGGCTGACATGTTCGCTGACCTCTACCACAACCCGA CCAAGCGGGTTGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGAATCATGAAAAGATTGCAATGTACCTACATCGATGGTCTGCCAGGCATTGTTCCGTTAGTGAACGCGCAGCCAGTTATGTGGCCCCGTCTAAGTAAG ACAAGGTAAAGAACGAACATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACTAACGTGTCAGTGAACT TGTCCCTGGCCCTAGCGGAGCTCGGCCGGCGCGTCATGCTGCTGGACGCCGACCTGGGTCTGGCTAACGTCGACGTGCTATTGGGGCTGACCCCCAAACG GACCCTCGCCGACGTGATCGAAGGCCGCTGCGAGCTGCGCGATGTGCTGCTGCAGGGGCCGGGTGGAATCCGTATCGTGCCGGCGGCGTCCGGCACCCAG AGCATGGTTCATCTGAGCCCGGCGCAGCATGCCGGCCTGATCCAGGCTTTCAGCGACATCGGCGACAACCTCGATGTGCTGGTGATCGACACCGCTGCCG
|
|
| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNMELEDELRKTQSRIVTAQAELSLRGDGDGSTNRQLFAGLPLTA AEPLIEPTFNEPHRPAPVAAAPAVDQRALDSMRFELNGLRELLEVQLGSLAWSQLQGSRPEQANLWRRLQRIGLSGPLARDLLALITEIDEPRQAWRMLL AHLARMIVTPEVEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVSVTHVDPGQSLAQALDPLLRKRVV LIDTAGLQASDPALRMQLESLAGRGIRAKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPR RHQLVSRAVSVQMQEEPSEEAMADMFADLYHNPTKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|