Pseudomonas chlororaphis O6, PchlO6_1630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACCGCAAATACACCGCCACCCTCAGTTACCTGCAGCCGTTCAAGCTGTGGGGCGAGTCGTTCAGCTTCAGCAGCCTGATGACCGGCCAGCGCAGCGAA GACGTGCTGTTCAGCCCGCAGCGCACCAGCCTGGGCGGGCAGTCGTCGATTCGCGGGTACAAGGACCAGTCGCTGTCCGGCGACAGCGGCGGTTACTGGC GCAACGACCTGCGCTGGAGCCGTCCGGTGACCCTCGGCTGGCTGCGCCCGGTGTTCGCCGAGTACGGCAGCAGCCTGGGCTACGACCAGGGTGTGATCCG TGGCGACCGCTACAACGGCGAGCAGCACGGGCGTCTGTCGAGCAACTCTCTGGAGCTGTTCGCCCGCGGCCAGCACCTGGCGACCAGCGTGACCTTCGCC CATTCCCTTGAACGCCCGGATGTCCTGAGCGAGCGCGAAGCGCCGATCTACTTCCGCCTGGATTTCCTCCTCTGATTCGCGTTTTTTCGAGACCTTCGAC
DNA Sequence for Gene
>PchlO6_1630
ATGGATGTTCGCCAATTCGCTTTCCTGGCCCGCCAGCCTTCTGCTGCCCTGAAAACCCGCGAGCACTTCTGGGGCATGCCCAAGCGCGGCCTGGCGTTCA TCCTGGCCAACGCCATGTTCTGGCAACCGCTGTGGGCCCAGGCGGAAGGCATCGTGGTCAGCGCGCCGGGCACCAGCCTGGGGCAGGCGGGCAACGGCGT GCCCATCGTCAATATCGCCACGCCCAATGGCAGCGGCCTGTCGCATAACCAGTTCCACGACTACAACGTCGGCCAGCAGGGGCTGATCCTCAACAACGCC ACCGACCGCACGCAGAGCACCCAACTGGGCGGGATCATCGTCGGCAACCCGAACCTCAAGGGCGTCGCGGCGCAAACCATCCTCAACGAAGTCAACGGTG GCAGCCCCAGCCAACTGCGCGGCTACACCGAAGTGGCGGGGCAGTCGGCCCATGTGATCGTCGCCAACCCCTATGGCATCAGCTGCAACGGCTGCGGCTT CATCAACACCCCGAAAGCCACCCTGACCACCGGCAAACCGGTGATCGAAAACGGCCAGCTCAGCCGTTATCAGGTCGATCAGGGGCAGGTGACCATCGAG GGCGCGACGCTCAACGCCAACAACGTCGACCGCTTCGAAATCATCACCCGCAGTGCCAAGATCAACGCCGAGATCCAGGCGAAAAACCTGAGCATCGTCA CCGGCCGCAACGACGTCAACGCCCGCACCCTGAACACCACCGCCCGCGCCGACGACGGCAGCGCCAAGCCGGAACTGGCGATCGACTCTTCGGCCCTGGG CGGGATGTATGCCGGGGCGATCAAGCTGGTGGGAACTGAAGCGGGCGTGGGGGTAAAACTCGACGGCAAGCTGATCGCCAGTGGCGGCGATATCCAGCTC GATGCCAACGGTCACCTGAGCATGGTCCAGGCCTCGGCCAATACGGCGATCAAGGTCAAGGCGGCCAGTCTGGAGGCCCAAGGTCCGGTCCATGCCGGTA GCACGCTCGATGTGCGGACCCAGGGCGACCTGAATAACCGACAAAACCTGACTGCGCGCGACAGCATCAGCCTGAGCGCCGGCGGCCGCCTGAGCAACAG CGGCATCATCGAAGCCGGGATCGAAACCGGCAACAGCCGCAATGCCAATGGCGATGTCAGCCTGAGCGCGCAGCACCTCGACAACAGCGGCAAGAGCGTG ATCGCCAGCCGTAACCTGACGGTCAACACTGTGCAAACCCTGAGCAACCAGGGCGGCACCTTGAGTGCCGGGCAGAGCGCCAACGTCAGCGCCGCGACCC TGGATAACCAGAGCAAGGGGCGGGTGCTGAGCAGCGGCAGCATCGATCTCAAGGCCGGTCAGGTGCTCAACGGCCGGGGCCTGATCAGCGGCGACGGCAA TCTCAGCGCCACATTGGGCCATCTGAATAACCACGATGGCGAAGTCTCCAGCGCCGGCATCACCACCCTGACGGCCAACAGCCTGGACAACAGCGACGGT CAGGTCAGCGGTGACGTGGCATTGAACATCGGTTTGAGCGGCGCCCTGAACAACCAGGGCGGTGTCCTGGGTTCCGCCAAGCGTGTGAGCATCAGCGCCG CCAGCCTGGATAACCGCCATGCCGGCAGCCTGGCCAGCGATGGCAGCCTGACCACGCGGATCGCGGGCCTGTTCGATAACCAGAGCGCAGGAGACCTGGG CGCCAAGGGTGTGGTGGACCTGCAGGCTGGCAGTCTCGACAACCGTGGCGGCAGCCTGACCGGCCAGGATCGCCTGACCCTGGACACGGCTTTGCTGGAC AACCGCGGGGGCAAGGTACGCGCCGACAAGCACCTGCAGCTCGATGTGCGCCAACTCGACAATCGCGACAAAGGCGTGATCACCAGCCAGGCAGGGATCG GCCTGACCGGTACCCACCTGGACAACCGCGGCGGCTTGCTCAGCGCCGTTGGCCCGGTGACGCTGAAGGCCCAGAACGTGCAAAACGCCTTGGGGCGGAT CGCCAGCCAAGGCGACGTACATGCGACTGTCGACACCCTCCAACAGCAGGGCGGCACCCTGGTGGCGCAAGGCAACCTGACGCTGATCGGCAGTGTTCTC GACAACCGTGACAACAGCCTGGTCGCGGCGACAAAAGCGCTGAAACTCGAGGTTCAGGGCATCGACAACCGCGCCGGAAAACTGTCCAGCGGAATCACCA CTGAAATTGCCGGCCAGCAACTCGACAACAGTGACGGCGGCAGAGTCCTGGTCGGTGGCGATCTGCAACTGAAGGTTGCCCGTCTTATCAATCAGAGCAA GGGGCTGATCCAGGGCAAGGGCACCACGACGCTGAACAGCCAGAGCCTGGATAACACCGATGGCGAGATCGACAGCCACAACGGGCTGCAGATCACCCTG GCCGGTGGGCTCGACAACACCCGCGGGCGGGTCCACAGCGACCGCTCCTTGACCCTGGGCACCAGCAAACTGACGAACACCGCCGGCCGTATCGAGAGCG TGGAAGACCTGTCGATCACCAGCCGTGGCGAACTGCTCAATCAGGGCGGCTCCATCAAGTCCGAGAAGGGCCTGACTGTTGCCAGTGGCCCTCTCGATAA CAGCCAGAAGGGCCTGCTGTCCGGCAAGCACGCCACGCAAATCACCGCGACGACCTTCAACAACAGCCAGGGTGGAAGCCTGCGCAGTGAAAGCAGACTT GGCCTGATCGCCACCCAGGTCAATAACGCCGATGGCAGCATCAGCAGCGCACAGGACCTCACGGCCAGCGTGACCGGGCTCGATCAGCAACACGGGGAGC TGTTCAGCGAGGCCGCCCTGAGCCTGGACCTGAACAACGGACAGCTCAATAACCAGAGCGGCTACATCCATTCGCCGGGAGCCCTGCTGCTCAAGAACCT GAAGGGTGTCGACAACCAAAAGGGTGAGATTTCCAGCGCCCGGGCTTTCAGCCTGAAAGCGCAAAGCCTGGACAACAACGGTGCCAAACTGATCAGTGAC CAGGGGCTGACACTGCGCATCGCCGAGGCCCTGAACAACGTGAAGGGCCTGGTCAGCGCCAGTTCCATCGACAGCCACAGCGCCAGCCTGGACAACACGG ATGGCCTGCTCAGCACGACCGGTGACCTGGACCTGAAGGTCGATACGGCTTTTGCTAACCAGCGCGGCACCGTTGTTGCCGACGGCGCGTTGCTGCTCAC CGCCGCCAGCCTGGACAACCGCGCTGCCGATATCTCCGGCAAACAGGATGTGACCGCGCACATCGGCACCCTGAACAACCAGGGCGGCAAGTTGATCGCC ACTGGCGCGCTGGACCTGACGGGGGCGAGCCTGGATAACCGCCAAGGCGGTCTGGTAGGGGCGACAAAAGCGCTGAAACTCAAGGTCGATACGCTCGATA ACCGAGGCGGCGAGCTTTCTACCCAGGCCGGTCTGAGCTTGACAGGCAAGCAGCTGGATAACAGCGACCAGGGTCTGGTCGAGGCCCATGACAGGCTGAC GCTCAAGGTCGATGAGGTGATCAACCAGGATGCCGGCTTTATCAATGCGCTGGCCGACCTGACGATCACGGGCGGGCGTATCGATAACCGCAGTGGGAAA ATCAAAAGCCAGCAAGGCCTGGACCTCACCCTCAAGGGCGACCTGCAAAACAACCAAGGGCTGATCGATAGCCAGAGCACCCTTGATGTGGCTGCGGCAG CCCTGGACAACAGCGACGGTCGTCTCATGAGCGCTGCTGCGCTGGACCTCGGCGCTCGTGGCGCCTTGACCAACGTGGGCGGCAAGCTGGTGAGCGAGGG CGGCGTGCAGTTGCGCAGCGCCAGCCTGGACAACAGCCACAAAGGCGTGATCAGCGGCAAGGGCGCGGTACAGGTCACCACCGGTGACTTCGATAACAGC CAGGCCGGCAGCCTCGACAGTGGCGACACCCTGGACCTGACGGCGGCAAAACTGACCAACGCGGCCGGGCGCATCGGCAGTGACAAGGCACTGACCGCGA AGGTCAGCAGCCTCGAACAGCAGGGCGGCAGTCTGTTCAGCAACACCAGCCTGAGCCTGGACCTGAATCGGGGGCGGCTGAACAACCAGGGCGGCTTCAT TCACGCACCGGGTGCGCTGCTGCTGAAAAACCTCAGTGACGTCGATAACCGCAACGGCGAAATCTCCAGCGACGCGACCTACGAACTCAACGCCAAGAGC CTGAACAACGACGGCGGCCAGTTGCTCGGCAACCAGGCATTGACCCTGCGGGTCGAACAGGCGCTCAGCTCCATCAAGGGCAAGATCGGTGCCTCGGCGC TGGAGGTAGAGGCCGCCAGCCTGGATAACAGCGCCGGCGCATTGACCAGCCGTTCCGGGCTGAAACTGACGGTACAGGGGTCATTGACCAACCAGGACCA GGGGCTGATCAACGCCATCAACGGCTTGAGCATCGCCAGCGGTGACTTGAACAACCGTCACGGTTCCGTTCTGGCCGGTGACTGGCTGAACCTGTCGGCC AAGGCGCTGAACAACACGGACAGCGGGCTGATCAACAGTAAAGGCGCGCTGGAGCTGACCGCGCACCAGTTGGACTCGAGCGATGCCGGCGAGGTATCGG CCAAGGGTGACATGAACCTCAAGGTCACGGGGCTGACGCAGCGTGGCGGTCGCCTGTTGGGCGACGGCGCGGTGACCCTGGACCTGGCCAATGGCGATCT CGACAACAGCCTCGGCAAGCTGAATGCCAAAGGCTTGTTGAGCATCAAGCAACTGCAGGACCTGAAGAACCAGCAGGGGACATTGTCCAGTCGTCAAGGC TTCACGCTGACGGGCCGCACGCTGGATAACAGCCAAGGCAAGTTGATCAGTGAGGCGGCACTGGGTGTCGTGTCCGGCCAGTTGCTGAATGCCAATGGCC TGGTGTCGGGGATCAAGGGCCTGACCGTCGAGGCGGGGAGCCTGGACAACCGCAACCACGGGACGCTCTCCAGCAAGGAGGGCAACCTGGCCGTTGATGT CAGCGGCGCCCTGCTGAACAGCGGCGCCGGCGCCCTGGCCAGCAATGGCACGCTCAAACTGAGCGCCGCGAGCCTGGACAACAGCGGCGAAGGGGTGGTC TCCAGTGTCGGCGGCCAGACGCTCACGGTCGCCGGCCTGCTGAATAACGCGGGCGGCGGTCTGCTCGACAGCGGTGCCACGCTTGATCTCAAGGCGGCAA CCTTGAACAACAAGGCCGGCAACCTCAGTGCGTTGCAATCGGTCGATCTGCGCGCCGGCAGCCTGGACAACAGTGGCGGCAGCCTGGCGACAAAAGGTGC CCTGACCCTGGATGTGGCGGGTAACCTGGACAACGCCCTGGGTACCCTCAGCAGTGACGGGGCCTTGTTACTCAAGCACGCGGCCCACGTCGATAACCGC GGCGGCAAACTGATCGGCCAGGATCTGTTGACCTTCAATGCCGACAGCCTGGACAACCGTGACCACGGCACCGTGGCGGCCAATCAGCAAGCCACGCTGG GTGTCGCGGGAGCTGTCCAGAATGCTCAGGGCGGTTTGATTTACAGCCGTGATGCGGGTCTTGAGCTGACGGCTGCCAGCCTCGATAACAGCAAGGCCGC GGTGCAAAGCCAGAACGGCCTGACGCTGAACATCAGCGGCGACTTCAACAATCAGGGCGGCAAGGTCATCGGTCAGGACGGCGCGGTCAGTATTACCGCG GCCAGCGTCGACAACCGTGGCGGGGTGCTGTCGAGCCTCAAGGGCGCGCTTGAAATCCACATCAGTGGCGTGCTGCTCAACGGTTATGACCTGAACGACC AACGCCAGCGTGGCGTGATCGAAGCCCAGCGCTTGAACCTGCGTGCCTTGGCCGGGCTGAACAACAACGGGGGGCGCATTGCCGCGCGCCAGGGCGATGT CATCGTCAACACCGCCGGCTTCGATAACCGCAATGGCGGGCTTTACGCCAGCGGCCAGCTTGGCGTCACTGCGACTACGTTCGACAACGGCGGCGACAAA GGCGGGCAGGTCGCCGGTCAAGGCATCGATCTCGGCTTGAGCGGTGCATTGAATAACCGTTTGGGGGTTATCGAGAGTGACACCTCGCTGCTTATTCGTG CGGCCAGTATCGACAACGCTCAGGGTCAGCTACGGGCCGCAGGGAGCGGCGGCAAGAGCCTGTTCCAGATCGGCGGCTTGCTGGACAACCGTAACGGCCG CATCGAAGTGGCCAGTACCGACCTGGGCCTCAACGCGACGAGCTTGCAGAATGCCGGCGGTACCCTGCTGCACTCCGGCAAAGGGCAATTCGATATCTCG ATGGCCAACGTCAGCGGGGCGGGCGGCACCCTGGTCACCCAAGGGGGGCTGACCCTCGCGGCCGATTCGTGGAGCAACACCAGCGTCATCCAGGCCGGGC GTCTGAAGGTCAACGTCAACAACTTCTACCAGAGTGCCGGCGGCCAGCTGTTGGCCTCCGACAGCTTCGAAGGCGGTGGCGGCAACTGGACCAACGATGG CCTGATCGCCAGTGACGGCAGCCTGAGCCTGCAACTGTCCGGCGCCTACGGTGGCAATGGGCGACTGACCAGCCTGGGTGACATGAGCTTCGGCGCCGCC CAGCTCGACCTGCCAGGCACCGCGACTATCGCCGGTGGGGGCAACACCCGGATCAATGTCGGCGGGGTGCTCACCAATCGCGGGCGCCTGAGCTCCGCCC AGGGGCTGACGGTCAATGCCGGGGTTATCAATAACTATGGCTCCCTCGGCAGCGCCGGGGCGCTGACCCTCAATTTCGGGACGCTGCTCAATTCCGGTGT CAGCGATGCCGAGCACAGCTCGATCTTCAGCGGCGGCGACATGCAGTTGCTGGGTAACACCTTCAGCAATCGCTATGCCGACGTTTTCAGCATGGGCAGC CTGCTGGTGGCCGCCAATGCCGGGCAGGCCCAGTCGAGCCTGCTGGAAAACCGCTCCGGCACGATCGAAAGCCTGGGCGACATGACCATTCGCGCCATGA CCGTGAAGAACGTCATGGACATCCTCACCTACTCGGAACACGAGAAGTACTACGCCAGCATCGTCGAACTGCCATGCGGCCCCTTTGGCGTATGCCATGT CAAGAAACATGGCAATCGGCGCAATGCGGTCTGGCAGCTCACCGAGCGTGATCGCCTGCAGGTGACCGCCAGTACGGCGGCCTCCAGTATCTCCAGCGGC GGGCAGCTGAACATCGGTGCCCAGGAGCTGAGCAACGAAAGCAGTGTTATCGCTTCCTCCGGCAACCTGGCGATCAATGCCGTCAGCATCAAGAACCAGG GGGTGGTGCCTCAGGACATTGAAACCACCACCATCAAATACAACCACGTGGATGAGTACCAGGGCGCGGTCGCCGCGGTGGCTGACTTCAATGCCAAAAA TGGCGCAAAGCCCTCCAGTACCTTCGAAGCCGACCTGGCGCGGTTCAACGCCCTGATGACCGGTACCCGAAAACTGGCCGGTGGCGGTACCAAGACCCTG GACAGCAGCGACGGCAAGCACTTCGACGCCATTATCCAGTCCGGCGCCAGCGTCCAGCTCAACGCCTCGGAGAAGATCGACAACGGCGTGGTACGTGGTT ATTACGCCTATGTCGGTGGTGGCAAGAAGACCGGCGACACCTCGGCGGGCAGTCAGTATTCGACGCCGATCTATATCAACTCGCAATTGCCGCCGGACCT GGCCAAGCAGCAGGTCAACCCCTTGGCCCTGCCAGGCTTCACGTTGCCGGTCGGGCAACACGGTCTGTTCCGCCTGAGCAGCGAAGGAGCCGGCGACACC GCGGCGACCCAGCGCAACCCGGCACCGATGGACTGGAGCATGGGCAGCATCAGCCTGAGATTCGCCGAGCGCGAGCAGAGCCAGGCCCAGAGTCAGGCGC GGGCGATCCAGGTCGATTCGGTGGCCCCGGTGGCGGCGACTGAGCGCAAGTTGGCGCAGGTTGGCGCGGTGCAGCCTGGCGTCGATGCCAGTCTGCCGAC GATTAGCGTCACGACCCCGACAGACAGTGGAACGGCTACTCAGGGGCCGGTGTACAGCCGTACCCCGGCGCAACAGGTGCAAGGCAGCATTGTGCGGGTC CAGGGCATCCCGACGCTCGACAATCCCCCTCAAGCGCACAAATACCTGGTTGAAACCAACCCGGTGCTGACCAACCAGAAACAGTTCATGAGCTCGGACT ACCTGCTGTCGAACCTGGGTTACAACCCCGACAACAGCTGGAAGCGCCTGGGCGACGGTTTCTACGAACAACGGCTGATCCAGCAGGCGGTGGTCGCCCG CACCGGCCAACGTTTCATCGATGGCCAGAACTCCGACGAGAAACTGTTCAAGTACCTGATGGATAACGCGCTGCAGAGCAAGCAGCAGCTCAACCTGGCG ATCGGCACCTCGCTGACCTCCGAGCAGGTCGCGGCCCTGACCCACGACATCGTCTGGCTCGAATCGCATCAGGTGAATGGCGAGAACGTGCTGGTGCCGG TGCTGTACATGGCCCACGCCAACAACCGCCTGGCCGCCAACGGCGCGCTGATCGCCGGGCAGGACATCAGCCTGATCGCCGGCAAGGACCTGCTCAACGC CGGCACCCTGCGCGCCACCAACAACCTCTCGGCCAAGGCGGGCAACGACCTGGTCAATAGTGGCTTGATCGAAGCCGGCAATCGCCTGGACCTGCTGGCG GGCAACAACCTGGTGAACAAGGCGGGCGGCATCATCGCCGGTCGCGATGTGAACCTGAGCGCGCTCAATGGCGACCTGATCAACGAACGCACGGTCACCA GCCACCAGAACAGCGGCGGCGATCTGCAACAACGGCGTGACTTCCTCGACAGCGCCGCGCGTATCGAAGCCGCCAACGACCTGACGCTCAAGGCCGGTCG CGACTTCAATAACGCCGCTGGCGTGCTGCAAGCCGCGCGTGACACCACCATCAACGCCGGCCGGGACGCCAACCTCACCGCAGTCGAACAGCAGGACAAC GAGACCCGGACCAACTCCCTGCACACCAGCACCAGCCAGCACGGCTCGGTGCTCACCAGCGGCCGCGACCTGACGATCAACAGCGGCCGCGACCTGTCCG CCATCGCCAGCCAGATCGACGCCAAACGCAACCTCGCCATGGCCGCCACCGGCAACCTGACCCTGGCCTCGGCGGCGGACGAGCAGCACTCGTACTCCAG TTCCAAGAAGTACAAGGGCCAGTCCGACAAGGTCAGCCAGGTCTCCACGGCGGTGACCGCGGGTGGCAGCGTGGCCCTCAGTGCCGGCAAGGATCTGGAG CTGATTGCCAGTCGGGTGAGTGCGGGGGACGAGGCGTATCTGGTGGCCGGCGGCAACCTGGCGCTGGAGTCCGCGGAAGACAGCAACTACAGCTTCTACA GCAAGACCAAGAAGAGTTCGTCGGGCAAGAAGAGTCGTCTCGACGAAACCGCCAGCACCACCAACATCGCCAGTTCTGTCACCTCGGGCAATAACAGCGT GTTGATCGCTGGCAACGACTTGCTGGTCAAAGGCAGCGAAGTCGCGGCAGACAAAGGCGCTGCCCGGCTGACGGCGGGTAATGACGTGCAAATCCTGGCC GTCAGCGACTCCAACAGCGCGCGCCACGAGAGCAGTAAAAGCAAAAGCAGCTGGGGCGGCCTGAAGGCCAGCAAGGTCCAGGACAAACTGGCGGAAACCC AGACCAAGGCGGTCGGCAGCATCATTTCCGGCAACACCGTGGACGTGGTTGCCAAGCACGATGCCACCGTCACCGGTTCCGCGCTGGTCAGCACCAAAGA CCTGAGCGTACAGGCCGGCAATGACCTGACCATCGACGCGGCTGAAAACACCTTCACCCGCAGCGAGCTGCACAAGCAGAAAAACCGCGACCTGATGGGC GTACTCACCGCCAACAACCTGGGCGTGGACGACATCACCGGCAACCAACACCTGTCGATCAGCAGCAGTAACCACACCGGCAAGGCGGCGCAAACCACCT TGACCGGCAGTACCGTGGGTTCGAGCGAAGGCAGTGTGAAGCTTGAGGCGGGGCGTGAGTTGAAGGTGGTGGCCAGTGATTTGGTCAGTACCAAGGATAT GAGTCTTACCGGTTCCAATGTGACCATCGCCGCGGGTCTGGAAACAGCCACGCAAAGCAGCACCGACAGCTCGAAGAGCCTGGCGGTCGGTCGTGTCGTG GGTGGCATGGTAGTCGATACGGTCAAGAGCATTCGCAATGACATCCGTGCGGCCAAGGATGCCGATGATAGCCGCCTGAAGGCGGTCAAGAGTGCTCAGG CATTGCTCTCTGCCTATAACGCGGTCGACAGTTTCAGCGCCGATGCAGCGAATCAATCCCAAGGCAAGCCAGCCAACAGCAGTGGTTCGCTTATCAAGAT TGGGACTGAGTTGGGTTCGACCCGAAGCAAAAGTACCAGCGAATACAGCAGTGAAACGGCCAAGCAATCGAGCTTGACCAGTGGTGCGGGTCTGGTCATT TCGGCGGTAGGGGACGCGCCGGGTACCCGGGGCGATATTCATGTCGTGGGTAGTAGCCTCAAGGCAAAAGACACGCTGTTGATGGCGAAAAACGACATCA CTCTGGAAAGCGCGCAGGACCGTGCGCAATGGGATAACCAGAATCGCAACAGCAAGACCAGTATCGGCGCCAGCTTCAATATTGGTGACCAGAACGGCTT CACCCTCGATCTCGGGGCGCAGATGGCAAAAGGCATGGGCACGGGCCACTCGGTCACCCAGGTCAACAGCACGGTGGATACTGGCCTGCTCATGCTGAAA AGCGGTCAGGACACCACCTTGGCGGGGGCGCAGGTACGAGCCGATACCATCAAGGCAGAGGTAGGCGGCAACCTCAATATTGCCTCCCGGCAGGATGAAG CCGATCAGAAAAACCGGCAGACCAGTGGCGGTTTCGGCGCCAGCATCTGTGTTCCGCCGTTCTGCTACGGCTCCATGGTCAGCGCCAGCGGCAATATCGC TGGTAGCAAGATGGACAGCAATTACCAGGCGGTGACTGACCAGACCGGGCTGTATGTAGGTAAAGGGGGATACGACATTTATGTCGGGGCCAATACCCAG CTGCAAGGCGCGGTGATTGCCAGTGAAGCCAGTGCCGACAAGAACCATCTCGACACCGGTCGCCTGATCGTCAGCGACATCAAGAACACCAGCGACATCA AAAGCCAGTCGGCCAGCCTGAGTGCTTCTTACACCAGCACCAAATGGGACAAACCGGGACAACCGGTGACGCCAGACAGCGAAAGGAAATGGGCACATTC GGAAACTGGCGGCACTCTGCCGCTGGCTCTCAAGGAGTCCGATCACAGTAGTACCCGCAGTGCCGTCAGCGAGGGGACGATCACGATCCGCGATCCAGCG GGCTCGCAGGATCTGGTAGGGCTGAATCGCGACACCAGCAATGCGAATCAGCATCTTGACCGGCCGGACGAGAAGAAGATGCAGGAGCGCATGGACCTGA TCCAGAGTTCCGCGCAGCTAGCGAGTACCACCATCAACCTGATAGCTAAAGCCAAGGCGGATTCCGCCAAAGAGCTGCTAAGCAAAGCCAAAACCCCTGA ACAGGAGGCGAAGGCCAACGCGGCCCTTGCGGATGCTGCTAGCTGGAGCGTCGGCGGCGACAAACGCATCATGGCCGACATTGCCTCGGGCCTGATCGCG GCGGGCCTCGGAGGCGTTGGTGGCGCGACGGCAGTTGGCATCGTTGCCAATACCACGGCCAATGACACCTTCAAAAAGATTGGTGATTACGCTGATGCAC AGAAGCGCAATGCTACCGATGACACCAGCCGAGCGGCATGGGCTGAAGGTGGTGCTGCCCGGGTATTGCTTCACGCCTTGGCCGGTGCTGCGATGGGGCT GTCGAGCGGCTCTGTACAGAGCGGTGCGTTGGGAGCGGGTGCGTCGGCAGCCCTGATGCCTGCGATTGCAGAGGCGTTGGGTAAAACTGGTATTGAACAG AGCAATCAGGAAGCTATTGCAACACTCATCGCCACGGGGCTTGGAGCATCGGCCGGATCGCTGGGAGGTACTGCCGGAGCAATCGCAGGTGGCGGTAGCG GGGCAGGGGTCGAGGTTAATAATCGCCAGCATCATCGTGATCAAGAACTTCCGCTGCTGAAGAAAAAAGCCGAGGAGCTGGAGCAGACACTGGGCAAACC GAAGTCTGACGCCCTTTGGGAGGATCTGCTCCTTCTCGCCAGTGGTGAAAAAATTGACGCAGTTGAAAAAGCGCGCTTGGAAGCCTTGGTTGAGAAGTGG GGGAGTGACCCGACCACGGATTGGTTCAAGCGCGATCTGGATGTTGCAAAAAACGCCGTAAAACAGCTGGCGGATCAAAAAATCCCGCTGACCTGGGCTG ATGGCAAGCCGATAATTGCCTATGGCAACCCTGTCTATGCGTTCGCCTCGACGCCAGAGCAGTTTAATGACTCAGGTTTGTTCAACGGCCTTGGAAAGGG TTATTACGGCGAACTGACGGCGGCCGAAAAATGGAAGCAGTATGGGAAAGCTCAGGCTGAGGCATACAGCAAGGAAATCCTGGATTTCTCGAGTAACAAC CTAGCCTCGAAAAATGCCGCTGATCGGATATTGACGCTGGCGGTGAAGAATACAGAGTCGGTGAGTATTATCGACGATGTCATCCTGTCGCTGGGTGGAG TGGTCGGAGGTAAGGCTACTCTCAAGACGATATTGGAAGCTGTAGCGGAAAGGCGGGCGGCGAAGAAGGTTGCGGCGGCGGAAGCTGAGAGCCTTGCTGC AAAAGAGGCAGGTGATACAGCTACGACGGGGGCGACAAAAGTTGTCCCAAGCATATTTACGCGTGAAAATATTGTTGGTGGATTGGGCGAAACCGTTCAG CCTCACCTCAAGGCTATTGCTGATCTTGACGCTGATGCACTGGTAGGTTTCCGAGGAAGTTTGGCTCGTGGTTATAAGGGGCCGCATAAGGGAAATGCGC CTTTTGATCCGCAGAGCTTCGATGTTGATGCCTTTATCGTGAGCGACAAGCTCGCTTCTGAGTTTGCTGGCAAAGTCAGATTTAGAAGTGGTGCTGAGAT TGATGGTATATCGTCAATTCAAAACGCTATTGATGAATCCCTTAGGAGAAATCCTTTATTCTCAGGGTTGAGGGATGAATCCTTTACATTCCGTATATTC ACACAGAAGGAGATTCAGAATCTTCAAGCTAAGCCAGATGCGCAATACTTCTTTATCAAGGGGAATGGGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATTCGAAGATGAATCTATGAAATGTTTTGCTCATGTCGGTATACGGCCGCATGGGACGTTGTTAGAAACTGCAGAGGTGTTGGGTGGAGTTCTCGCGGT ATCATTCGTGGAGGATGAGTGTCGGCGTTATGATGAATACCCAGCATTTGTTGCTGAAGTGAAGAACATACGTTATGCATTACTTGGTATTCCTGATCCT GATGATGACTTGAGGGATGAGCCAACAGATGATTTTGAGTTGGTAGTCGAGCCGATTAGTTCGCTACCTCAGGTAAAGAAGGCCGATGTGTCAGAGGCGC TGGTTTCAGTTATCGAGAGAGATGGAAGGCTTACCTGTTGGGTCTTGAAGTAAATATTTTTCAGGTAATATGGTGTAAAAATAAAAGTTGTAGAGCGGGT GGAACTAAGAACTGCCTTGTTGAGGGGGGGCTATTGAGATAGATGTAGGGGATTGTTATATACTCTTGGAGTGGTTGATGTAATAAGGGGCTAGAGCAGG
Amino Acid Sequence
>hemagglutinin
MDVRQFAFLARQPSAALKTREHFWGMPKRGLAFILANAMFWQPLWAQAEGIVVSAPGTSLGQAGNGVPIVNIATPNGSGLSHNQFHDYNVGQQGLILNNA TDRTQSTQLGGIIVGNPNLKGVAAQTILNEVNGGSPSQLRGYTEVAGQSAHVIVANPYGISCNGCGFINTPKATLTTGKPVIENGQLSRYQVDQGQVTIE GATLNANNVDRFEIITRSAKINAEIQAKNLSIVTGRNDVNARTLNTTARADDGSAKPELAIDSSALGGMYAGAIKLVGTEAGVGVKLDGKLIASGGDIQL DANGHLSMVQASANTAIKVKAASLEAQGPVHAGSTLDVRTQGDLNNRQNLTARDSISLSAGGRLSNSGIIEAGIETGNSRNANGDVSLSAQHLDNSGKSV IASRNLTVNTVQTLSNQGGTLSAGQSANVSAATLDNQSKGRVLSSGSIDLKAGQVLNGRGLISGDGNLSATLGHLNNHDGEVSSAGITTLTANSLDNSDG QVSGDVALNIGLSGALNNQGGVLGSAKRVSISAASLDNRHAGSLASDGSLTTRIAGLFDNQSAGDLGAKGVVDLQAGSLDNRGGSLTGQDRLTLDTALLD NRGGKVRADKHLQLDVRQLDNRDKGVITSQAGIGLTGTHLDNRGGLLSAVGPVTLKAQNVQNALGRIASQGDVHATVDTLQQQGGTLVAQGNLTLIGSVL DNRDNSLVAATKALKLEVQGIDNRAGKLSSGITTEIAGQQLDNSDGGRVLVGGDLQLKVARLINQSKGLIQGKGTTTLNSQSLDNTDGEIDSHNGLQITL AGGLDNTRGRVHSDRSLTLGTSKLTNTAGRIESVEDLSITSRGELLNQGGSIKSEKGLTVASGPLDNSQKGLLSGKHATQITATTFNNSQGGSLRSESRL GLIATQVNNADGSISSAQDLTASVTGLDQQHGELFSEAALSLDLNNGQLNNQSGYIHSPGALLLKNLKGVDNQKGEISSARAFSLKAQSLDNNGAKLISD QGLTLRIAEALNNVKGLVSASSIDSHSASLDNTDGLLSTTGDLDLKVDTAFANQRGTVVADGALLLTAASLDNRAADISGKQDVTAHIGTLNNQGGKLIA TGALDLTGASLDNRQGGLVGATKALKLKVDTLDNRGGELSTQAGLSLTGKQLDNSDQGLVEAHDRLTLKVDEVINQDAGFINALADLTITGGRIDNRSGK IKSQQGLDLTLKGDLQNNQGLIDSQSTLDVAAAALDNSDGRLMSAAALDLGARGALTNVGGKLVSEGGVQLRSASLDNSHKGVISGKGAVQVTTGDFDNS QAGSLDSGDTLDLTAAKLTNAAGRIGSDKALTAKVSSLEQQGGSLFSNTSLSLDLNRGRLNNQGGFIHAPGALLLKNLSDVDNRNGEISSDATYELNAKS LNNDGGQLLGNQALTLRVEQALSSIKGKIGASALEVEAASLDNSAGALTSRSGLKLTVQGSLTNQDQGLINAINGLSIASGDLNNRHGSVLAGDWLNLSA KALNNTDSGLINSKGALELTAHQLDSSDAGEVSAKGDMNLKVTGLTQRGGRLLGDGAVTLDLANGDLDNSLGKLNAKGLLSIKQLQDLKNQQGTLSSRQG FTLTGRTLDNSQGKLISEAALGVVSGQLLNANGLVSGIKGLTVEAGSLDNRNHGTLSSKEGNLAVDVSGALLNSGAGALASNGTLKLSAASLDNSGEGVV SSVGGQTLTVAGLLNNAGGGLLDSGATLDLKAATLNNKAGNLSALQSVDLRAGSLDNSGGSLATKGALTLDVAGNLDNALGTLSSDGALLLKHAAHVDNR GGKLIGQDLLTFNADSLDNRDHGTVAANQQATLGVAGAVQNAQGGLIYSRDAGLELTAASLDNSKAAVQSQNGLTLNISGDFNNQGGKVIGQDGAVSITA ASVDNRGGVLSSLKGALEIHISGVLLNGYDLNDQRQRGVIEAQRLNLRALAGLNNNGGRIAARQGDVIVNTAGFDNRNGGLYASGQLGVTATTFDNGGDK GGQVAGQGIDLGLSGALNNRLGVIESDTSLLIRAASIDNAQGQLRAAGSGGKSLFQIGGLLDNRNGRIEVASTDLGLNATSLQNAGGTLLHSGKGQFDIS MANVSGAGGTLVTQGGLTLAADSWSNTSVIQAGRLKVNVNNFYQSAGGQLLASDSFEGGGGNWTNDGLIASDGSLSLQLSGAYGGNGRLTSLGDMSFGAA QLDLPGTATIAGGGNTRINVGGVLTNRGRLSSAQGLTVNAGVINNYGSLGSAGALTLNFGTLLNSGVSDAEHSSIFSGGDMQLLGNTFSNRYADVFSMGS LLVAANAGQAQSSLLENRSGTIESLGDMTIRAMTVKNVMDILTYSEHEKYYASIVELPCGPFGVCHVKKHGNRRNAVWQLTERDRLQVTASTAASSISSG GQLNIGAQELSNESSVIASSGNLAINAVSIKNQGVVPQDIETTTIKYNHVDEYQGAVAAVADFNAKNGAKPSSTFEADLARFNALMTGTRKLAGGGTKTL DSSDGKHFDAIIQSGASVQLNASEKIDNGVVRGYYAYVGGGKKTGDTSAGSQYSTPIYINSQLPPDLAKQQVNPLALPGFTLPVGQHGLFRLSSEGAGDT AATQRNPAPMDWSMGSISLRFAEREQSQAQSQARAIQVDSVAPVAATERKLAQVGAVQPGVDASLPTISVTTPTDSGTATQGPVYSRTPAQQVQGSIVRV QGIPTLDNPPQAHKYLVETNPVLTNQKQFMSSDYLLSNLGYNPDNSWKRLGDGFYEQRLIQQAVVARTGQRFIDGQNSDEKLFKYLMDNALQSKQQLNLA IGTSLTSEQVAALTHDIVWLESHQVNGENVLVPVLYMAHANNRLAANGALIAGQDISLIAGKDLLNAGTLRATNNLSAKAGNDLVNSGLIEAGNRLDLLA GNNLVNKAGGIIAGRDVNLSALNGDLINERTVTSHQNSGGDLQQRRDFLDSAARIEAANDLTLKAGRDFNNAAGVLQAARDTTINAGRDANLTAVEQQDN ETRTNSLHTSTSQHGSVLTSGRDLTINSGRDLSAIASQIDAKRNLAMAATGNLTLASAADEQHSYSSSKKYKGQSDKVSQVSTAVTAGGSVALSAGKDLE LIASRVSAGDEAYLVAGGNLALESAEDSNYSFYSKTKKSSSGKKSRLDETASTTNIASSVTSGNNSVLIAGNDLLVKGSEVAADKGAARLTAGNDVQILA VSDSNSARHESSKSKSSWGGLKASKVQDKLAETQTKAVGSIISGNTVDVVAKHDATVTGSALVSTKDLSVQAGNDLTIDAAENTFTRSELHKQKNRDLMG VLTANNLGVDDITGNQHLSISSSNHTGKAAQTTLTGSTVGSSEGSVKLEAGRELKVVASDLVSTKDMSLTGSNVTIAAGLETATQSSTDSSKSLAVGRVV GGMVVDTVKSIRNDIRAAKDADDSRLKAVKSAQALLSAYNAVDSFSADAANQSQGKPANSSGSLIKIGTELGSTRSKSTSEYSSETAKQSSLTSGAGLVI SAVGDAPGTRGDIHVVGSSLKAKDTLLMAKNDITLESAQDRAQWDNQNRNSKTSIGASFNIGDQNGFTLDLGAQMAKGMGTGHSVTQVNSTVDTGLLMLK SGQDTTLAGAQVRADTIKAEVGGNLNIASRQDEADQKNRQTSGGFGASICVPPFCYGSMVSASGNIAGSKMDSNYQAVTDQTGLYVGKGGYDIYVGANTQ LQGAVIASEASADKNHLDTGRLIVSDIKNTSDIKSQSASLSASYTSTKWDKPGQPVTPDSERKWAHSETGGTLPLALKESDHSSTRSAVSEGTITIRDPA GSQDLVGLNRDTSNANQHLDRPDEKKMQERMDLIQSSAQLASTTINLIAKAKADSAKELLSKAKTPEQEAKANAALADAASWSVGGDKRIMADIASGLIA AGLGGVGGATAVGIVANTTANDTFKKIGDYADAQKRNATDDTSRAAWAEGGAARVLLHALAGAAMGLSSGSVQSGALGAGASAALMPAIAEALGKTGIEQ SNQEAIATLIATGLGASAGSLGGTAGAIAGGGSGAGVEVNNRQHHRDQELPLLKKKAEELEQTLGKPKSDALWEDLLLLASGEKIDAVEKARLEALVEKW GSDPTTDWFKRDLDVAKNAVKQLADQKIPLTWADGKPIIAYGNPVYAFASTPEQFNDSGLFNGLGKGYYGELTAAEKWKQYGKAQAEAYSKEILDFSSNN LASKNAADRILTLAVKNTESVSIIDDVILSLGGVVGGKATLKTILEAVAERRAAKKVAAAEAESLAAKEAGDTATTGATKVVPSIFTRENIVGGLGETVQ PHLKAIADLDADALVGFRGSLARGYKGPHKGNAPFDPQSFDVDAFIVSDKLASEFAGKVRFRSGAEIDGISSIQNAIDESLRRNPLFSGLRDESFTFRIF TQKEIQNLQAKPDAQYFFIKGNGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site