Pseudomonas chlororaphis O6, PchlO6_1454

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATCGATGACGGTTATTTTTTTCATGGCAGCACCTGACGGAAAAGGCCTACAGATTGGCTCGGGAAAGGGCCGCATCGCTTGTGGGTTTTCTCTGCGGCG AATGACGAAATCGGCACAGTGCCGGGGCTCGCCCATCCTGTAGCCGCTGCCGCAGGCTGCGCACGGACGCGCAGCGTCCGCCAGATCGGACGACGTGGTG TGACAGAAAGGTCGGGGATACAGGTTCTGCGTCTGCTGCGCAGCCGATCGCAGCCTCGTACCTCGGCAGCGGCTACAGGCGTGCGGTGCGGCTGCTGGTG CAGGGGATTTCAGGCGGGTCGAAGGAGGGTAGTGCGCAGGCGCAATGGACGGAAAAGGTCTGTGGACGATTGGGCGAATGTGCCGATTTCGTCTTGCTTG AGCGGGAAAAACCTCAAGCTCCTGGGCGGCGAAAGGCGGAATCTGTTTTTCGTTTCCAACGCCTGTCGGCCCGGCCGACTCAACCAACAAGGACAAGACC
DNA Sequence for Gene
>PchlO6_1454
ATGAGCCGTAAAGCCATCCACTGGAGCGGTGTGTTCCCTGCTGTCAGCACCCAGTTCAAAGCTGACTTTTCCCTGGACCTGGACGCCACCCACAGCGTCA TGCGCAACCTGGTGGCCGATGGCGTGTCGGGCCTGGTGGTGTGCGGCACCGTGGGCGAAAACACCTCGCTGAGCACCGCGGAAAAACTCTCGGTGATCGA GGTCGCCAAGGACGCCGCCGGCGGCCGCGTACCGGTGATCGCCGGGATCGCCGAGTTCACTACCGAGTTCGCCCGCAACACCGTGCGCGAGGCGGCCAAG GTCGGGGTCGACGGAGTGATGGTCATGCCGGCCCTGGTGTATTCGGCCAAGTCCCATGAAACCGCCGCGCACTTTCGCAGCATCGCCACCGGCACCGACT TGCCGGTGATGGTCTACAACAACCCGCCGATCTACAAAAACGACGTCACCCCGGACGTGCTGATCGCCCTGCAGGACTGCGAAAACATCGTCTGCTTCAA GGATTCCTCCGGCGATACCCGGCGCTTCATCGACCTGCGCAATGCGGTGGGCGACCGCTTCGTGCTGTTCGCCGGCCTGGATGACGTGGTGGTGGAAAGC ATCGCTGTCGGCGCCGAAGGCTGGGTCTCCGGCATGTCCAACGCCTTCCCGAAAGAGGGCGAGACCCTGTTCCGCCTGGCCAAGGAAAAACGCTTCGAGG AAGCCCTGGCACTGTACCGCTGGTTCATGCCGCTGCTGCACCTGGATGCGCGTCCGGACCTGGTGCAGTGCATCAAGCTCTGCGAGGAACTGGTCGGTCG CGGCTCCTCGATCACCCGTCCACCCCGCCTGGCCCTGCAGGGCGAGACCCTGGCCGAGGTCAAGGCGATAGTCGCCAAGGCCCTGGCCGAGCGTCCGCAG TTGCCGGACGTCGGTCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGCTAACAGGACGCTCCCGCGCGCTGGGTGGCGGGGGCGCCCTGGTCCACGAGAAGAACAATCAGGTACTCGCGCAGTGCCGTGTTTCACCACGTCG GTACCCCGTCCGCGGGAGGCCGGCGCGACATTCGATCTGCCTACTCCAATAACTCAATAAGAAGGCGCGCCTATGTCAGGCCAAGGCAAATTCAAGAAAC AGCTCTCTCTGGTTGACCTCACCTTCATCGGCCTGGGGGCGATCTTCGGCTCCGGCTGGTTGTTCGCCGCCAGCCATGTCTCGGCCATCGCCGGGCCGGC GGGGATCTTCTCCTGGCTGCTCGGCGGCTTTGCCGTCCTGCTGCTGGGCATCGTCTATTGCGAACTGGGCGCGGCCTTGCCGCGAGCGGGCGGGGTGGTG CGTTATCCGGTGTTCTCCCACGGGCCGCTGCTGGGCTACCTGATGGGCTTTATCACGCTGATCGCGTTTTCCAGCCTGGTGGCCATTGAAGTGGTGGCGG
Amino Acid Sequence
>dihydrodipicolinate synthase
MSRKAIHWSGVFPAVSTQFKADFSLDLDATHSVMRNLVADGVSGLVVCGTVGENTSLSTAEKLSVIEVAKDAAGGRVPVIAGIAEFTTEFARNTVREAAK VGVDGVMVMPALVYSAKSHETAAHFRSIATGTDLPVMVYNNPPIYKNDVTPDVLIALQDCENIVCFKDSSGDTRRFIDLRNAVGDRFVLFAGLDDVVVES IAVGAEGWVSGMSNAFPKEGETLFRLAKEKRFEEALALYRWFMPLLHLDARPDLVQCIKLCEELVGRGSSITRPPRLALQGETLAEVKAIVAKALAERPQ LPDVGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site