Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGAGCACTATGCGGCGACCTTGCTGGCGTTGGCCGAGGGCAGGGCCCTCGAACCCTTGCTGCGTGCCTTCGAGTGGCGCCTGCTGGACGACCTGGGCTA CGGTTTTGCCCTGGACACGGATATCCACGGCGCGCCGATTGAGGCGCAGGGCATGTATCGCCTGCAGGTGGATGCCGGCCTGGAGCAGGTTCAGCTGTTG CAACCGGGCCTGTTCAACGGCACCGAGCTGCTGGCCATGGCGCAAGCCGACTGGAGCGCCCCCGGGGCGCTGGCGGCGGCCAAGCGCCTGATGCGCCAGG CGCTGGCGGTGCACCTGGGCGGTCGGCCATTGGTCAGTCGCGAATTGTTTCGCAAGCCCTAGCCTGTCTTGTTGCACAAATCCGCTTGAATCCTGATCCG ACTCGACTTTGAGGGCTGCACGGCCGAACGCCGGCAGTTATTTTCGCCAGCGGACACTATATGCTGTGCACCGAATCTCTAACTCCTCAGGAGCGCTTCC
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DNA Sequence for Gene |
>PchlO6_1070
|pdxJ
GTGACCACCAGCAATCGCATTCTTCTTGGCGTGAACATCGACCACGTAGCCACCCTGCGTCAGGCCCGGGGTACCCGTTACCCTGACCCGGTCAAGGCGG CGCTGGACGCGGAAGAGGCGGGGGCCGACGGCATCACCGTGCACCTGCGCGAGGACCGCCGGCATATCCAGGAGCGCGACGTGCTGCTGCTCAAGGACGT GCTGCAAACCCGAATGAACTTCGAGATGGGCGTCACCGAGGAAATGATGGCGTTCGCCGAGCGCATCCGTCCGGCGCACATCTGCCTGGTTCCGGAAACC CGCCAGGAGCTGACCACCGAAGGCGGCCTGGATGTCGCCGGGCAGGAGGCGCGGATCAAGGCGGCGGTAGAGCGTCTGTCGAAGATCGGCGCCGAAGTGT CGCTGTTCATCGATGCTGATGAGCGGCAGATTGCAGCCTCCCGTCGGGTGGGCGCACCTGCCATCGAGTTGCACACCGGGCGTTACGCCGATGCCGAAAC GCCGAGCGAGGTGGCCGAGGAGCTGCAACGCGTGGCCGATGGCGTGGCGTTCGGCCTGGGCCAGGGCCTGATCGTCAATGCCGGCCACGGCCTGCATTAC CACAACGTCGAGGCGGTCGCGGCGATCAAGGGCATCAACGAGCTGAACATCGGCCATGCGCTGGTGGCCCATGCGCTGTTCGTCGGCTTCAAGGGTGCGG TGGCGGAGATGAAGGCGCTAATCCTGGCGGCGGCCAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGTCTTTGATGCTATCGCGAGCAAGCTCGCTCCTACAGGGTTGGCGGCGTGCACGGAAATAGTGGCCTCCGTCTATCTCTGTAGGAGCGAGCTTGCTCG CGATGCGGTTTAAAGCGGCGGGGTTTCCTGGGTCGGCTTGGTCTTGTCCACGCCCGGCACATGCAGATTGCCTTCGGCCACCTGGTCGCCTTCCAGCTGC GGCTGTGTGACCCAGGTCAGGATGTCGTAGTAACGACGGATGTTGGCGACGAAATGCACCGGCTCGCCGCCCCGGGCGTAGCCATAGCGGGTCTTGCTGT ACCACTGCTTCTGCGAGAGGCGCGGCAGCATTTTCTTCACGTCCAGCCACTTGTTCGGGTTCAGCCCTTCCTTTTGCGCCAGCTTGCGGGCGTCGTCCAG GTGGCCGCTGCCGACGTTGTAGGCGGCGAGGGCGAACCAGGTGCGGTCCGGTTCTTCGATTTTGTCGTCCAGTTGATCCTTCATGTACGCCAGGTACTTG
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTTSNRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMAFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLSKIGAEVSLFIDADERQIAASRRVGAPAIELHTGRYADAETPSEVAEELQRVADGVAFGLGQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKGAVAEMKALILAAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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