Pseudomonas chlororaphis O6, PchlO6_0036

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCCCAGCCATAGTCGGCCGGGTAGATATCGCTGGTCAGGCGTTCTTCGTAACCGTGCAGCTGGTCCGGGCCGCAGAAATGCATCTTGCCTGACAGCG CGGTGCGGTAGCCCAGGCGGCGCAGGTAATGGGCGTAGGTCGGGACGTCGGCGGGAAAGTCGGCGGCGTTGTCATAGGCGCCGATCTTGCTCGGCAACTG GCCACTGACCAGGGTGAAACGCGAGGGCGCGCACAGCGGGCTGTTGCAGTAGGCGGCGTCGAACACCACGCCCTGGGCGGCGAGACGGCTCAGGTGCGGC AGCTTGATGGGCGATGGACCGTAGAACGGCAACATTGGCGCGGCCATCTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGTATTCGCGGCATT CCATAGTGGGCAGTTATGCGAAAGTGTTGCGATCGAGCATGTAATCCGTGGCTTTCGCGGTAAAGCCCATGTACGGCAATGACTAGGATAAGCACAGCTT
DNA Sequence for Gene
>PchlO6_0036
ATGTATGAAGCGCTTGGCGACCTGTCCCTGGACCTGTTCCGCGTATTCGAGGCGGCGGCGCGCGAGCGCAGCTTTACCGCCGCGGCGGTGGAACTGGGGA CCACCCAACCGGCCATCAGCCAGCAGATCAAGCGGCTGGAAGAACAGCTCGGCACCCGGCTGTTCGACCGCATCTACCGTGGCATCGAACTGACCGAGGC CGGCAGTCAGTTGTTCGAACAGGTGCAGGCCGGCTTGCAGAGCATCGACAGCGGCCTGAGCGCTATCACCGCCCAGCATCAGCATGAGGTGCTGCAGGTG GCCACCGACTTCGCCTTTGCCGCCTACTGGCTGATGCCGCGCCTGCACCGTTTCCACGCCGCCAATCCGCAGGTGGATGTGAGCCTGGTCACCAGCGAGC GCAGCCACAACATGCTGCGCACCGATATCGACGTGGCGGTGCTGTTTGGCGATGGCCGTTTCAAGCAGGGGGAAAGCCACTGGCTGTTCAATGAAGAGGT GTTTCCGGTGTGCAGCCCGCTGCTGCTCAAGGAGCGGCCGCTACCGCTGGGCGCCCAGTCGCTGCTGGAGTTCCCGCTGCTGCACCTGAAGGGCGAAAAC AGCAGTCACTGGTTCGACTGGAACGGCGTGTTCCGCGAGTTGGGGATCGCTACCCCGCCGACACCCGGGCAGCTGCGTTTCGACAACTACACCCTGCTGA TCCAGGCGGCGATCGGTGGCCAGGGCGTGGGCATCGGCTGGCGCCACCTTGTGGATAACTTGCTGGCGCAAGGTCTGTTGTGCCGGCCGATCAGCGAAAC GCTGGTTTCCCGCTACGGCTATTACGTGGTCCTGCCCCAGCGCAAACGCCGGGGGGCGCTGATCCAGCGGTTTTTCGACTGGCTGATGGCCGAGCAGGCC GACAGCGCGCAATCCCTGACCGGGCTGGGCCTGCCTTCGATTGCCATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTTGGGGTTGGCGCGCAAGCCATCGCGAGCAAGCTTGCTCCTACATGGGATCGCATAACCTTCTGTAGGAGCGAGCTTGCTCGCGATAAGGATTCAAC ACACGAAGTTCACATGCTCGCCCACATGCAGGTTCAGCTGCTGTTCGTCGGCGATGCCGGCAGCTACCCGCGCCAGTCGCCGCACTGGCTCGTCCAGCTT CGGCGGGAGGCTGCCGGCGGGCTGGCTGAAGTGTTCCAGGGTCAGCCCGGGTACGCTTTGCGGCGCATTCACCAGGGTCCAGCGCAAGCTGCTGCCTTGC AGCGCGTCGAGGATGGTCTCGGCCGTCTGACGGTGTGGATAACCCTCCATCTCCGGCTGGTCCAGCACCTCGAAATTCCCCACCAGAAACAGGCGTCGGA CGCCTGCGGCCTGCATGCCGGCGATCAGCGCTTCGACTGCCTGGACTTGTTCCCGGGGTTCGAGCAGCAGGTTTTCCTGTTGTTCGAGGCCCATGGGCAG
Amino Acid Sequence
>LysR family transcriptional regulator
MYEALGDLSLDLFRVFEAAARERSFTAAAVELGTTQPAISQQIKRLEEQLGTRLFDRIYRGIELTEAGSQLFEQVQAGLQSIDSGLSAITAQHQHEVLQV ATDFAFAAYWLMPRLHRFHAANPQVDVSLVTSERSHNMLRTDIDVAVLFGDGRFKQGESHWLFNEEVFPVCSPLLLKERPLPLGAQSLLEFPLLHLKGEN SSHWFDWNGVFRELGIATPPTPGQLRFDNYTLLIQAAIGGQGVGIGWRHLVDNLLAQGLLCRPISETLVSRYGYYVVLPQRKRRGALIQRFFDWLMAEQA DSAQSLTGLGLPSIAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site