Pseudomonas chlororaphis O6, PchlO6_0029

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCCCGGCGCAACCGGATCATCAGCGGCTTGTCCCTTGGCGTGCTGGTGGTGGAGGCCAGCGTCGCCAGCGGTTCGCTGATCACCGCCCGGCTCGCCGC CGAGCAGGGCCGCGAGGTGTATGCGATACCCGGGTCGATCCATCACCCCGGGGCCCGGGGCTGTCATCAGCTGATTCGTGATGGCGCGGTGCTGGTGGAA ACCATCGAACATATCCTCGAAGCCCTGCGTGGCTGGCAACGACTGCCGTTATCCCCAGCCCCGCCACCAGTCGCGCCCGCTCACCCGTTGCTGGCGCTGT TGCATGCTGCGCCGCAGACCAGCGAGGGCCTGGTGCAGGCCAGTGGCTGGAGCCTGTCCAGGGTGCTGGCGGCGCTTACGGAGCTGGAGCTGGAGGGCCA TGCGGTATGTGAAGCAGGCTGCTGGTATGCCCGGGCAAAAGGCTAGGCTTTATAAGCAGGATCGGTAAACTGCGCACAGCCTTAATCCGGAGAGTCAGCA
DNA Sequence for Gene
>PchlO6_0029
ATGGTCAGCAGTTGGCGTGTGCAACAAGCCGCACGAGAAATTCGCGCAGGGGCGGTGATTGCCTACCCAACCGAAGCAGTCTGGGGGTTGGGGTGCGACC CGTGGAACGAAGAGGCGGTGGACCGGTTGCTGGCCATCAAGTCGCGCTCCGTGGACAAGGGCCTGATCCTGATCGCCGACAACATCCGCCAGTTCGATTT CCTCTTCGAGGATTTCCCCCAGGAATGGCTCGATCGCATGGCCAGCACCTGGCCAGGCCCGAACACCTGGCTGGTACCCCATCAGAATCTGTTGCCGGAA TGGGTCACCGGGGTCCACGACACCGTGGCCTTGCGGGTCAGCGATCATCCACTGGTGCGCGAGTTATGTGCGCTGGTGGGGCCGCTGATTTCCACCTCGG CCAATCCCCAGGGGCGCCCGGCCGCCCGCACGCGGATTCGCGTCGAGCAGTATTTCCGCGGGCAGCTGGACATGGTCCTGGGCGGCAGCCTGGGCGGGCG CAAGAACCCGAGCCTGATCCGCGACCTGGTGACCGGCAAGATCGTGCGTTCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGCGTCATCGTTTATCGCGGGCAAGTCGGATCGCCGCCCGCGATGCATTTCAAGGCAGCAGAATGGTCGAACCCGTGGTGCGCCGCGCCGACAGTTC GGTCTGCGCCTTCGCCGCGTCCGCCAGTGGATAACGCTGGCCGATCTCGATCTTCAGCTTGCCGCTGGTAATCATGCCGAACAGATCGTCGGCCATGGCC TGCAGGTTCTCGGCATTGTTGGCGTAGGTGCCCAGGGTCGGACGGGTGACATACAGCGAGCCCTTGGCCGCCAGGATGCCCAGGTTGACCCCCTCCACCG CGCCCGAGGCGTTGCCGAAGCTGACCATCAGGCCCCGTGGCTGCAGGCAGTCCAGCGAGGTCAGCCAGGTGTCCTTGCCCACGCCGTCGTAGACCACCGG GCATTTCTTGCCGTCGGTCAGCTCCAGTACGCGCTTGGCCACGTCTTCATGGCTGTAGTCGATGGTTTCCCAGGCGCCGAGGGATTTCGCCAGCGCGGCT
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKSRSVDKGLILIADNIRQFDFLFEDFPQEWLDRMASTWPGPNTWLVPHQNLLPE WVTGVHDTVALRVSDHPLVRELCALVGPLISTSANPQGRPAARTRIRVEQYFRGQLDMVLGGSLGGRKNPSLIRDLVTGKIVRSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site