Pseudomonas chlororaphis O6, PchlO6_0017 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis O6 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCCGGTGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTACGGCCTGGAACGCCTGGCCATGTACCTGCAGGGCGTGGATTCGGTCTACG ACCTGGTCTGGGCCGACGGCCCGTTCGGCAAGGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAACACGCCAA CGTCGAGAAGCTGTTCGAACTGTTCGATTTCTACGAAAGCGAAGCCAAGCGCCTGATCGAGCTGGATCAGCCGCTGCCGCTGCCGAGCTATGAAATGGTC CTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGACCGCGCGTCAGCAGTACATCCTGCGTGTGCGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCCCGCGCCAAGCTGGGCTTCCCGATGGCAACCCCGGACCTGCGTGATGAAGTGTTGGCTAAGTTGGAGGCGGCACA
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| DNA Sequence for Gene |
>PchlO6_0017
|glyS
ATGAGTGCGCAAGATTTTCTGGTTGAACTGGGCACTGAAGAACTGCCACCCAAAGCACTGAACACCCTGGCCGAAGCCTTCCTGGGCGGTATCGAAAAAG GCCTGCAGGCCGCCGGCCTGAACTTCGAGACCAAGCACGTCTACGCCGCACCACGCCGCCTGGCGGTGCTGATCAGCGGCCTGGCCACCCAGCAGCCGGA TCGCAGCATCAACCTCGACGGCCCGCCGCGTCAGGCCGCCTTCGACGCCGAAGGCAACCCGACCCAGGCTGCCCTGGGCTTCGCCAAGAAATGTGGCGTG GACCTGAGCGAAATCGACCAGAGCGGGCCGAAGCTGCGCTACAGCCAGAGCATCAAGGGCAAGCCGACCGCCAGCCTGCTGCCGACCATCGTCGAAGACT CGCTGAACGACCTGCCGATTCCAAAACGCATGCGTTGGGCTGCGCGCAAGGAAGAGTTCGTGCGTCCGACCCAATGGCTGGTGATGCTGCTCGGTGACCA GGTCATCGACTGCACCATCCTCGCCCAGAAAGCCGGTCGCGACTCCCGCGGTCACCGCTTCCATCACCCGCAAAGCGTGCGCATCACCTCGCCGGCCAAC TACCTGGACGACCTGCGTGCCGCCTACGTGCTGGCCGACGCCAACGAGCGTCGCGAGCTGATCAGCAAGCGCACCGAAGAACTGGCGCGCCTGCAGGAAG GTACTGCCATCGTTCCAGCCGATCTGCTGGACGAAGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAACGTTTCCTCGAAGT GCCGCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGTCGACGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCC AACATCGAAAGCAAGGACCCGCGCCAGATCATCGAGGGCAACGAGAAAGTCGTTCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGA AACAGAAGCTCGAAGACTTCAACCAGCGCCTGCAGAACGTGGTGTTCCAGGAGAAGCTGGGCAGTGTCTACGACAAGGCCGAGCGCGTCTCGAAACTGGC CGCGTTCATCGCCCCGCGCATCGGCGGCGACGCCCAGCGCGCCGCGCGCGCGGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAAATGGTCGGCGAGTTC CCGGAAATGCAAGGCATCGCCGGTTACTACTACGCCCTCAATGACGGCGAACCGGAAGACGTCGCCCTGGCGCTGAACGAGCAGTACATGCCGCGTGGCG CCGGCGCCGAGCTGCCAAGCACCGTCACCGGTGCCGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCAAC CGGCAGCAAGGACCCGTACGCGCTGCGTCGTGCCGCGCTGGGCGTGCTGCGCATCCTGATCGACAAGAAGCTCGACCTGGACCTGACCGAAGCCGTGGCG TTCGCCGTCAGCGCGTTCGGCAGCAAGGTCAAGAGCGCCGGCCTGGCCGATCAGGTCCTGGAGTTCATCTTCGACCGTCTGCGTGCCCGTTACGAAGACG AAGGCGTGGATGTCGCCACCTACCTGTCGGTCCGTGCCCTGAAGCCGGGTTCGGCCCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCAA GCTGCCGGAAGCCGCTGCGTTGGCCGCGGTGAACAAGCGCGTTTCGAACCTGCTGAGCAAGGTCGAAGGCAGCGTGCCGACCACCGTGGAAGCCAAGTAC TTCGACAACGCCAACGAGTTCTCCCTGTACTCGGCGATCCAGCAAGCGGACCAGGCCGTGCAGCCAATGGCCGCGGCGCGTCAGTACAGCGAGACCCTGG CCCGCCTGGCCGCCCTGCGCGAGCCGGTCGACGCCTTCTTCGAGAAGGTGATGGTCAACGCCGAAGACGCCAACGTGCGGGCCAACCGCTACGCGCTGCT GGCACGTCTGCGGGGTCTGTTCCTCGGTGTCGCCGACATCTCGTTGCTGGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGTACGTGAAACTGCTGATTCTCGATCGGGACGGAGTGATCAATCACGACTCCGACGCTTACATCAAATCGGTGGAGGAGTGGATTCCGCTCCCCGGC TCGGTCGAAGCCATCGCGCAGTTGAGCAAGGCCGGCTGGACGGTAGCGGTCGCTACCAACCAGTCGGGCATCGCTCGCGGTTACTACGATGTCGCCACCC TCGACGCCATGCACGAGCGCCTGCGCGCCCTGGTGGCCGAGCAGGGCGGCGAACTCGGCCTCATCGTGTACTGCCCCCATGGCCCGGACGAAGGTTGCGC CTGCCGCAAACCCAAGCCCGGCATGTTGCAGACCATTGCCCGGCACTACGAAGTGGATCTGGCTGGTCTATGGTTTGTGGGCGACAGTCTCGGTGACCTG GAAGCCGCAAAAGCCGTCGACTCTCAGCCAGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACCCTGGGGAAAACCCTACCGGTAGGCACCTTGATTTTTG
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSAQDFLVELGTEELPPKALNTLAEAFLGGIEKGLQAAGLNFETKHVYAAPRRLAVLISGLATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV DLSEIDQSGPKLRYSQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKEEFVRPTQWLVMLLGDQVIDCTILAQKAGRDSRGHRFHHPQSVRITSPAN YLDDLRAAYVLADANERRELISKRTEELARLQEGTAIVPADLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA NIESKDPRQIIEGNEKVVRPRLTDAEFFFKQDKKQKLEDFNQRLQNVVFQEKLGSVYDKAERVSKLAAFIAPRIGGDAQRAARAGLLSKCDLATEMVGEF PEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGAELPSTVTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTEAVA FAVSAFGSKVKSAGLADQVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTTVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYSETLARLAALREPVDAFFEKVMVNAEDANVRANRYALLARLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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