Pseudomonas umsongensis 20MFCvi1.1, D470_RS0123345 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00011.11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGGCCAATGGCGGCGTGAACTCCGGCTTCATGATCGCTCAAGTAACGGCTGCGGCACTGGCCAGCGAGAACAAGGCGCTGTCCCATCCGCATTCGGTG GACAGCCTGCCGACTTCCGCCAACCAGGAAGACCACGTGTCCATGGCGCCGGCTGCCGGCAAGCGTCTGTGGGAAATGGCCGAGAACACTCGCGGGATTC TCGCGGTGGAATGGTTGGCGGCGGCCCAGGGGCTGGATCTGCGCGACGGTCTGAAAACCTCGCCAAAACTGGAAAAAGCCCGTGCGATCCTGCGTGCTGA AGTGCCGTTCTACGAGAAGGACCGCTTCTTTGCGCCGGACATCAATGCGGCCAGTGAGTTGTTGGCGACGCGTTGCCTGAATGGCCTGGTGACGGCGAAG TTGCTGCCTAGCCTGTAATAGCTCCTTCCCTGATGATCGTTCCCACGCGGAGCGTGGGAACGATCATTTAGCGTCGAATAAGAATAATTAAGGACGAGAG
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| DNA Sequence for Gene |
>D470_RS0123345
|proY
ATGCAACAGCCAGCAAAAGGTTTGAAACGCGGGCTCTCTGCCCGACATATTCGCTTCATGGCACTGGGGTCGGCGATCGGCACCGGGCTGTTTTACGGTT CTGCCTCGGCCATTCAAATGGCCGGCCCCGCGGTCCTGCTCGCTTACCTGATCGGTGGCGCGGCGGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGC GGTGCATAACCCGGTGGCCGGTTCTTTCGGCCAGTACGCCAGCACCTATCTGGGGCCAATGGCGGGCTTTATCCTCGGTTGGACCTACGCATTTGAAATG GTCATCGTCGGTATGGCCGACGTGACCGCATTCGGCATTTACATGGGGTTCTGGTTTCCGGAAGTCTCCCGCTGGATCTGGGTGCTGGGCATCGTTTCGG TGGTAGGCGGCTTGAACCTGTGCAACGTCAAAGTCTTCGGCGAAATGGAGTTCTGGTTGTCACTGCTCAAGGTCGCGGCCATCGTCGCGATGATCCTTGG CGGTTTCGGCATCATGCTGTTCGGCATCAGCAATGCGCCCGGTGCCCAGGCGACCGATATCAGCAACCTCTGGACCCAGGGTGGCTTCATGCCCAATGGC GTGGGCGGCTTGATCGCCTCGTTTGCGGTGGTGATGTTTGCCTTTGGCGGTATTGAAATCATCGGCGTTACCGCCGGTGAAGCCAAAGACCCGCAGCATG TGCTGCCGCGCGCGATCAATGCCGTACCGTTGCGAATCCTGCTGTTCTACGTGCTGACGATGCTGGTGCTGATGTCGATCTTCCCGTGGCAGCAGATTGG CAGCCAAGGCAGTCCGTTCGTGCAGATTTTCGACAACCTGGGGATCAGCTCGGCGGCGACCATCCTCAACATCGTGGTGATCTCGGCGGCGGTGTCGGCC ATCAACAGTGACATCTTCGGCGCGGGCCGCATGATGTATGGCCTGGCTCAGCAAGGGCACGCACCGAAAGGCTTCGCTCGCTTGTCGCGCAATGGCGTGC CGTGGCTGACGGTGATGGTGATGAGCTGCGCGCTGCTGCTGGGTGTGTTGCTGAACTACCTGATCCCGGAAAACGTGTTTCTGCTGATCGCCTCCATCGC GACCTTTGCCACGGTGTGGGTCTGGCTGATGATTCTGTTCACCCAGGTGGCCATGCGTCGCTCCATGAGTGCCGAGCAGGTCGCACAATTGAAATTCCCG GTGCCGTTCTGGCCCTATGCGCCGATGGCGGCGATTGCCTTCATGCTGTTCATCTTCGGCGTGCTGGGTTATTTCCCGGATACCCAGGCGGCGTTGATCG TCGGCGTGGTCTGGATTGTGTTGCTGGTGCTGGCCTACCTGACGTGGGTCAAACCGGCGGCAGGCAAGGCGGTACCGGTGGAACAGGAACCCATTTTTTC TCATCGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTAACGGAGGCCAAGGATGAAAACGCTCTGGCAACACTGCCACGTCGCAACCATGGCGCAAGGCGTCTACTCGATCATCGAGGATGCGGCCATCGTGAC GTCCGGTGCGCACATTGAGTGGATCGGCCCACGCGCCGAACTGCCGGCCGGCGAGTACCCGGCGGTCAATGACTTGAGCGGGGCCTGGGTCACCCCGGGC CTGATCGACTGCCACACCCATACGGTATTCGGCGGCAACCGCAGCGGCGAATTCGAGCAGCGCCTGCAAGGCGTCAGCTACGCGGAAATCGCCGCTGCCG GCGGCGGCATTGCCAGCACCGTGCGCGCCACCCGCGCCGCCAGTGAAGACGAACTGTTCGCCAGCGCCGCCAAGCGTCTGAAAAGCCTGATGCGTGATGG CGTGACCACCGTCGAAATGAAATCCGGCTACGGCCTGGACCTGGCCAGCGAACGCAAGATCCTGCGGGTGATCCGCCGTCTCGGCGCCGAGCTACCCGTC
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| Amino Acid Sequence |
>permease
MQQPAKGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVHNPVAGSFGQYASTYLGPMAGFILGWTYAFEM VIVGMADVTAFGIYMGFWFPEVSRWIWVLGIVSVVGGLNLCNVKVFGEMEFWLSLLKVAAIVAMILGGFGIMLFGISNAPGAQATDISNLWTQGGFMPNG VGGLIASFAVVMFAFGGIEIIGVTAGEAKDPQHVLPRAINAVPLRILLFYVLTMLVLMSIFPWQQIGSQGSPFVQIFDNLGISSAATILNIVVISAAVSA INSDIFGAGRMMYGLAQQGHAPKGFARLSRNGVPWLTVMVMSCALLLGVLLNYLIPENVFLLIASIATFATVWVWLMILFTQVAMRRSMSAEQVAQLKFP VPFWPYAPMAAIAFMLFIFGVLGYFPDTQAALIVGVVWIVLLVLAYLTWVKPAAGKAVPVEQEPIFSHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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