Pseudomonas umsongensis 20MFCvi1.1, D470_RS0102130
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTCTTTCGAGAAGCTCAACGCCACCGCTCTGGCCAAACACCCCGGCTCGACCATCACCGGCACCGAGCTTGCAGAAGAGTACGGCAAGTACAAATACC AGATGGAACTGCGCGACCCGCAAGGCATTGAGTGGGATATGGAATTGGATGCGGTCAGCGGGCAGGTTCTCAGGGATCATCAGGATACGTAATGAAGGTG CTTTCATTTTCAAGCATGGCGCTGGTGCTTCTGGCTTTTTGCTCGGTGGCCGTGGCCCGCGACCTGGATCAGGACGAAGCCCTGCGCCTGCGCCAACAGG GCGTGATCCTGCCGCTGGAGCAGCTCTTGCAGCAAGCGCTGGACCGCTATCCCGGGGCCAAGTTGCTGGAAGCCGAGCTTGAAGAAAAACACGACGTCTA TGTTTATGAAGTCGAGCTGCTGACCGCCGAAGGCGTGGTGCGCGAGCTGGACGTCGATGCCACCACCGGCCACGTGCTGAAAGACAAGGAAGATTGATCG
|
|
| DNA Sequence for Gene |
>D470_RS0102130
ATGCGTTTGCTCCTGGTGGAAGACCACGTGCCGCTGGCCGACGAATTGATGGCCGGCCTCAATCGGCAAGGCTACGCCGTGGACTGGCTGGCCGACGGCC GCGACGCGGTGTACCAGGGCAGCAGCGAGCCTTATGACCTGATCATCCTCGACCTCGGCCTGCCGGGTTTGCCGGGGCTTGAGGTGCTGGCGCAGTGGCG GGCCGGTGGCCTGGCCACGCCGGTGCTGATTCTCACCGCACGCGGTTCCTGGGCCGAGCGGATCGAAGGCCTCAAGGCCGGCGCCGACGATTACCTGAGC AAACCCTTCCACCCGGAAGAACTGCACCTGCGCATTCAGGCCTTGTTGCGCCGCTCCCACGGCCAGGCCAATCAGCCGACACTCAAGGCCGCCGGGCTGC ACCTGGATGAAGGTCGCCAGTGCGTGACCCGCGACGGCGCCGACATCCAGCTCACCGCCGCCGAATTTCGCCTGCTGCGCTATTTCATGCTGCACCCCGA ACAGATCCTTTCCAAAAGCCACCTCGCCGAACACCTCTACGACGGTGAAACCGAGCGCGACTCCAACGTACTAGAAGTCCACGTCAATCACCTGCGCCGC AAGCTCGGCCGCAGCGTGATCGAAACCCGTCGCGGTCAGGGTTACCTGTTCGGCGGGCAAGCCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTCGATCCAGCGCCGCTTGAGCCTGGGCCTGATCAGCGTGATGGTGATCGTCGGCCTGGTGCTGGCGCAAACCAGCCTGTGGCTGTTCGAAATGGGTTT GCAGCGCTACCTCGAAGCCGGGTTGCGCAACGACAGTGAAAACCTGCTGGTGGCGCTGGTGCGTGGCCCGCAGGGGTTGCAGCTGGATGAGCGCCATCTG TCGCCGGCCTATCAGCGCCCGTTTTCCGGGCACTATTTTCGTATCGACTTTGCCGACAGCCATTGGCGCTCCCGCTCGTTATGGGATCAGGACCTGCCGC GGCTCGAACACCCGGGCCTGAACAGCAACCTGCAACTGGGGCCGGAAGGGCAGCAGTTGCTGGTGCTGCGTTCGGACTACCGGCGGCTGGGCCAGGCGAT TTCCATCAGCGTCGCTCAGGACTACACGCCGGTGCGCGAGAGTTTCTGTCGCATGCAACAAGTCGGTCTCGGGTTGGGGCTGGCGGGGCTGTTGCTGATT
|
|
| Amino Acid Sequence |
>transcriptional regulator
MRLLLVEDHVPLADELMAGLNRQGYAVDWLADGRDAVYQGSSEPYDLIILDLGLPGLPGLEVLAQWRAGGLATPVLILTARGSWAERIEGLKAGADDYLS KPFHPEELHLRIQALLRRSHGQANQPTLKAAGLHLDEGRQCVTRDGADIQLTAAEFRLLRYFMLHPEQILSKSHLAEHLYDGETERDSNVLEVHVNHLRR KLGRSVIETRRGQGYLFGGQAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|