Pseudomonas umsongensis 20MFCvi1.1, D470_RS0102115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGAGCTGCCGAAGGCT-N72-AGCCTTCGGCAGCTCC | 485077 | 485180 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCCGCGATG-N74-CATCGCGGCCG | 484537 | 484632 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGGCGCCGCCGG-N58-CCGGCGGCGCCC | 484815 | 484896 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAAACAGCC-N6-GGCTGTTTTT | 483418 | 483443 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 163 | 483423 | 483438 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |