Pseudomonas resinovorans DSM 21078, G559_RS0124000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 439 | 612 | 4.9E-59 |
| Pfam | PF07696 | 7TMR-DISM extracellular 2 | IPR011622 | 7TM-DISM receptor, extracellular domain, type 2 | 39 | 173 | 1.3E-23 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 445 | 611 | 2.4E-45 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 439 | 611 | 9.9E-64 |
| Pfam | PF07695 | 7TM diverse intracellular signalling | IPR011623 | 7TM-DISM receptor, extracellular domain, type 1 | 184 | 388 | 1.4E-42 |
| Coils | Coil | Coil | - | - | 389 | 409 | - |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 455 | 613 | 9.42E-50 |
| Gene3D | G3DSA:2.60.40.2380 | - | - | - | 33 | 180 | 1.7E-24 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 446 | 610 | 5.1E-50 |
| PANTHER | PTHR46663 | DIGUANYLATE CYCLASE DGCT-RELATED | - | - | 392 | 625 | 5.3E-69 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 451 | 605 | 5.50713E-66 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 450 | 606 | 3.7E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.