Pseudomonas sp. CFT9, CFT9_17566

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR32305	-	-	-	69	515	4.9E-64
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	362	3.06E-42
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	378	453	5.3E-13
Gene3D	G3DSA:2.30.110.50	-	-	-	20	325	1.1E-87
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	505	9.8E-118
Gene3D	G3DSA:3.55.50.10	-	-	-	95	188	1.1E-87
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	29	323	4.5E-76
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	184	6.38E-56
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	10	522	0.0
Gene3D	G3DSA:4.10.220.110	-	-	-	221	280	1.1E-87
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	355	457	1.9E-36
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	445	602	6.28E-30
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	365	453	7.32E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.