Pseudomonas sp. CFT9, CFT9_12381

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAACGCTGTTTAGGGTCAGCGTTAAGAATAAGGACTGCCGCCGTGAACACACTCACACACGCCTCGTCGATAAACGTACTGCTGATCAGTTGCGTGCTCA GTGCAGGTGTCAGCCTGACGAGCCAGGCGGGTGACGGTGTGATCGTGACCGGGCGTACGGTGCAGGGCCACATGTACGGGCGCACCTCGCTGCCCGACCC CTACCCCAACACCGCCAATGCCAACCCCAGCAAAGAGATCAACAACGCTTTGACCGGCGAACTCAGCGACAGGGATATCGGCGGCATCAGCAGTGGCTCC AGCCTCGCCCGCTCCCTGCAGCCCAACGGCAGCCTGTCGGGCCTGGGCGCCACCCAAAACAGCATGTCGACACTCGGCGCTGGCGCAGCGGCAGGCCATG GTGCGGGCAGCGGCAGCAGCATGGGCGGGCAGATCAGCGACTCGATCCAGCGTGGCATGGCGCCGCTCAACAACCTCGGCAGCATGATGGGGGGCAAGTG
DNA Sequence for Gene
>CFT9_12381
ATGAAGCGCGCCCTGTTGGTGCTTGCCCTGCTGGGCAGCGCCTCGGCCATGGCCGACAACACCGCCGTGATCAACCACAGCGGCCAGCAATACGACGGCG TGCTGTCGATCAACCAGGCCGCCGGCATGGGGCAACAAATGTCCAACAGCCGCGCCATCGCGCTCGGTGGCCAGGCCACCAACGTCGACATCCAGCGCGT CGACGGCAAGGTCGACCCGTCCCTGAACGCCAAGGCCGCGATCCAGGGCAACTCATTCAGCAGTGGCAACGGCGTACTGGGCATCAACCAGTCTGCCGGG GCTAATAACCAATCCATCAACGCTGTGCGGATCAGCCTCAACCCTGGCCCGCAGAGCATCGATGACAGCGTCCTGTTGCAACAGAACACGACGACGCTGG CAACCGACTCAGGGCTCACCCCCACCACTGGCAGCCGCCAGGTCGTGACCAGCGACCAGGCCTTCACCGGCAGCCGAGGAGTGACACAGGTGAACCAGAG TGCCGGGGTGGGGAACCGAGTGGCTAACACCCTGGGCATCACTATCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCTTGGTAGACGTTCGTTAGACCGTACCAACACTTAACCAACTAATTAGAAGCAAGGAGAAACACCATGAAACCTCAAATGGCTCTGAAACCAATGGT TTTCGCTCTCGCCGCACTCATGGCTGCTGCTGCTCAAGCGGGTGGCTGGCATCCAACCCCACAACCCACCGGTACTGTGGCCGCTGTGGTCACTGACGTA CAGAAAAGCGAACACAACAAATTCGACGACACCGACACCGAGAACAACGCATCAGCCGACAACTCGGTAAATAGCAACAGCGGTAATGTCGGGGTCAACG CACAATCAGGTTCCGGCAACCAGGCTGACAACGCCGGCGCCATTTCCAGTGCCAAAGGCGACTTCGCCACCGTGTTTGCCGTGATCGATGTCGACCAAGG CAGCTCGCATAACAACTTCGTCAACAAAGGCACGCAAAACAACGCCTCCCTGGACGGTTCCATCACCGGCAACTCCGGCAACGTGGGTTACAACGGCCAG
Amino Acid Sequence
>hypothetical protein
MKRALLVLALLGSASAMADNTAVINHSGQQYDGVLSINQAAGMGQQMSNSRAIALGGQATNVDIQRVDGKVDPSLNAKAAIQGNSFSSGNGVLGINQSAG ANNQSINAVRISLNPGPQSIDDSVLLQQNTTTLATDSGLTPTTGSRQVVTSDQAFTGSRGVTQVNQSAGVGNRVANTLGITIK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site