Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTATCTTGATCAGTACGGCACGCCGCAGACCCTGGCGGATTTGCCGCGTCACAAGGTCATCGAATATTTCTCTGCCAGTTCTAACAAGCGTTACGGCCT GGAGTTCATGATCGATGGGCTGGTGAAGGATTTCAGTCTGCCCAAGGCGATGTCGATCAACAGCGCCGACGGTTACCTGGCGGCATGCGAAGCGGGCTAC GGTCTGGTGCAGACGCCGTATTACCATATCGCCGAGCAGTTACGTCGGGGGACCTTGCTGGAGGTGCTCAAAAGCTATCGGCCACCGGCAATGGCACTGC TCGCTCTTTATCCGCCGCACCGGCAGATGTCGCGCCGGGTCAGGGTATTCGTCGACTGGCTGGTGGAGGTGTGTGCGCGCAAGGAACTGCTGGAAAAACT CAATGGTTGAAGCAAATTCAGCCGCATCCGATCTAGGTCGTCGGGCGCTTTCGTGGTTAACTTCCGGCTCTTCCCAAACCCTGGAAAAAGGACTCAGTTC
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DNA Sequence for Gene |
>CFII64_06795
ATGGCTCAAGTGACTCGTAGAGGCAACCCTGTCCAAATCAATGGTGACCTGCCAGCAGTTGGCAGTGCTGCGCCGGCATTCACGTTGGTCGGCGGTGACC TGGCCGATGTGACCCTGGCTGACTTTGCCGGCAAGCGCAAAGTGCTGAACATCTTCCCAAGTGTCGATACCCCGACCTGCGCGACGTCCGTGCGCAAATT CAACGCCCAGGCCAATGACCTGAACAACGCCGTGGTGTTGTGCATCTCCGCTGATCTGCCATTCGCGCAAGCGCGGTTCTGCGGCGCCGAAGGCCTGGAA AACGTCAAGAACCTGTCCACCATGCGTGGCGCCGAGTTCATGAAGAACTATGGTGTCGAGATTGCCGATGGCCCGATGCAAGGCCTGACCACTCGCGCCG TTGTGGTGCTTGATGAAAACGACAACGTGCTGCACAGCGAACTGGTTCCGGAAATCGGTCAGGAACCTGACTATGACGCGGCGCTCTCCGTATTGAAGTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAACCGGCAACACTTCGACGGCCTGAACCTGCTCAGGCCGTTTTTATTTATGCTTCAGGTGTTTAACAGAAGTAACGCCAAGGTAAATTGCCGGTAAAGG CGCTTTGCTTACTGCCTGTCTGTGCTTATTGTTCAACTCCTGAAGAAGCCCCACCCGCATTGGTTGATTATTCATGCAATTGTCTGGTTCCCGTAGTTCC CGCCGCTGGCTGATCAGTCTGCTTGTCCTCTTGGTTATCATCGGCCTGTGCTGGTGGTTCTGGCCGTCCTCGGCCGCCCATAAGGATGCTGGTAAAGGTT CTGGCGCCAGCCGGTCAGCCAGTGCGGCGAAGGCGAGCCCGGCGCGACCCGGCTTTGGCGGCGCTACCGCGCCGGTCCCCGTGCGTGTGGCGCCTGCGGT ACTCGGGGATTTCCCGATCTACTACAAAGCCCTGGGCACCGTGACGGCGATGAACACCATCAATGTGCGCAGCCGGGTCGCGGGGGAATTGGTCAAGCTC
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Amino Acid Sequence |
>thiol peroxidase (atypical 2-Cys peroxiredoxin)
MAQVTRRGNPVQINGDLPAVGSAAPAFTLVGGDLADVTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDLNNAVVLCISADLPFAQARFCGAEGLE NVKNLSTMRGAEFMKNYGVEIADGPMQGLTTRAVVVLDENDNVLHSELVPEIGQEPDYDAALSVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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