Pseudomonas syringae BRIP39023, A988_18093
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTCAACGGCAATCTGGTGGTACGCAACGGCGTGGCCAGCAATCCGGACCTCAAGGTTCGTACGCCGGGCATGGCCGTCAACGGTAACGGCGACGTCGA CCTGCGCGTACTGGGCATGAATTACCGCGTCGGCATCATCGTTGAAGGCGACAAGAGCGACATGCCGGACCCGGCCTGCGAGATCAATCCGCGCTTTGTC GGTATCGAGTGGCCGGTGCAGTGCCGCGGCCCGCTGGAACTGGGCGCCAAGGCTTGCCGTCTGGACAAGGAAGGTGTCGGCCAGATCGCTGCGAAACTGG CGGGCGACCGGATCAGCGAGAAGCTCGAGGACAAGCTGGACGACAAACTCGGTGACAAGGTCAGCCCCGAGCTCAAGGACGCCCTCAAGGGACTGTTCAA GCGCTAGGGCAACGTGAACTGCTCAGGAGCGCCCTCGCGGCGCCCCGCTGGCACGACCGTTCATATCACCACTCATATCCAGACGAGAGCCCTCCAGGCC
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| DNA Sequence for Gene |
>A988_18093
ATGCAACCCGAACAATTCTCCAGCGCCGTGCTGGACTGGTACGACCGTCATGGCCGACATGACCTGCCCTGGCAACAAGACATCACGCCGTACCGGGTGT GGGTGTCGGAAATCATGCTGCAGCAGACCCAGGTCAGCACCGTTCTGAATTACTTCGACCGCTTCATGGAGGCCCTGCCAACCGTGCAGGCGCTGGCCGA CGCGCCCGAGGACGAAGTGCTGCACCTGTGGACCGGGCTGGGTTACTACACCCGCGCCCGCAACCTGCAGAAAACGGCAAAAATCGTGGTCGCCGACCAT GGCGGCGAGTTTCCCCGCGATGTTGAAAAACTCATTCTGCTGCCCGGCATCGGCCTGTCTACCGCTGGCGCGATTGCCAGCCTGAGCATGGGCATTCGCG CGCCGATCCTCGATGGCAACGTCAAACGCGTGCTGGCGCGCTTCACCGCGCAAGAGGGCTACCCTGGCGAACCCAAGGTGGCCAAGCAGCTGTGGGCCAC CGCTGAACGCTTCACGCCGCACCGCCGGGTCAACAACTACACCCAGGCGATGATGGACCTGGGGGCCACGCTCTGCACCCGCAGCAAACCGAGCTGCCTG CTCTGCCCGCTGGAGCGCAGTTGTGAGGCGCACATGCTGGGCCTGGAAACGCGCTACCCGATCCCCAAGCCGCGCAAGACCGTGCCGCAGAAACGCACGC TCATGCCGATGCTCGCCAACGAAGACGGCGCGATCCTGCTTTATCGTCGCCCTTCCAGCGGCTTGTGGGGCGGCCTGTGGAGCCTGCCGGAACTGGATGA CTTCGATGACCTTCAGCACCTGGCCACCCAACACGCGCTGCAACTGGGCGAGCACCATGAACTGCCGGGGCTGATCCACACTTTCAGCCACTTCCAGTTG AGCATCGAACCCTGGCTGGTCAAGGTCCAGGAGTCCACCGATCACGTGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCACGCCTGGGCC TTGCCGCCCCGGTGAAAAAGCTGCTCAAACGCGCAGCCGACGTATTGAACGCAGGAGAGTCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGCACCGTAATGTGCCGCAAATACAAAGAAGAACTGCCCGGCCTGGAACGCGCCCCGTATCCGGGCGCCAAGGGCGAGGACATCTTCAACCACGTCTC GCAGAAAGCCTGGGCCGACTGGCAGAAACACCAGACCCTGCTGATCAACGAGCGTCGCCTGAACATGATGAACGCCGAAGACCGTAAATTCCTCCAGACC GAGATGGACAAGTTTCTCTCCGGCGAAGAATACGCCCAGGCCGAAGGCTACGTTCCCCCCGAAAAATAAAGCGTTTCACGCAGTGAAGGTCGTAAGCGTC GGTAATAATTCAAATTTTTTAAAAAACACGCTTGACGACCTCCTGAAAAACACGTCTAATGCGCCCCGTTGCCCAGATAGCTCAGTCGGTAGAGCAGGGG ATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCACCTTTCGTTTTCAGGTGATGCCAAGCACACCTGAAAGCACACAAGAAGCCCGCC
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| Amino Acid Sequence |
>adenine glycosylase
MQPEQFSSAVLDWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALADAPEDEVLHLWTGLGYYTRARNLQKTAKIVVADH GGEFPRDVEKLILLPGIGLSTAGAIASLSMGIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHRRVNNYTQAMMDLGATLCTRSKPSCL LCPLERSCEAHMLGLETRYPIPKPRKTVPQKRTLMPMLANEDGAILLYRRPSSGLWGGLWSLPELDDFDDLQHLATQHALQLGEHHELPGLIHTFSHFQL SIEPWLVKVQESTDHVAEADWLWYNLATPPRLGLAAPVKKLLKRAADVLNAGESS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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