Pseudomonas syringae BRIP39023, A988_04433

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGAAGGCAACGGTATCTCCATCGAGTACAAGGAGTTCGGCGTGCGCCTGACCCTGACCCCGACAGTCGTGGGCCGGGACCGGATTCTGCTGAAGGTCG CACCGGAAGTCAGCGAGCTGGACTTCTCGGCCGGTATCACCATCGCCGGGACCACTGTGCCGGCACTCAACATCCGCCGTACCGACACCAGCATTGCGCT TGCCGACGGCGAGAGCTTCGTGGTCAGCGGCCTGATCAGTTCCAGCAACAGCGGCTCGGTGGACAAGTTTCCCGGCCTCGGCGACATCCCGATTCTCGGT GCATTTTTCCGCAGCTCGCAGATCCAGCGCGACGAGCGCGAACTGCTGATGATCGTCACTCCGCATCTGGTCCAGCCACTGGCCGCCAACGCCCGCCTGC CGTCACTGCCAGGCGAGGGGCTGCGCACCTATGACCCGAGCTTCCCGCGTCTGTATTTTCTGGAAAACGGCGATTTCGACCGCCGCGACGGATTATCCAA
DNA Sequence for Gene
>A988_04433
ATGAGCCAGAGCCTGAGCCAGACCTTCCTGGCAATCACCCGTAATAATACCGACCTGGAGTGGCTGCAAAGTGCTCTGGGTTCGCTGGGTCAGGTGGTCA GTGCCGGTACGGGCAGCCTCGACGACCTCCTGGCGCTGGTGGACGTGACGTTTGCCAGCGTGGTGTTCGTCGGGCTCGACCGTGAGCATTTGATGACTCA GAGCGCCCTGATCGAAAGTGCGCTGGAAGCCAAGCCGATGCTGGCCATCGTTGCGCTCGGCGATGGCATGGACAACCAGTTGGTGCTTAACGCCATGCGC GCCGGGGCCAGGGACTTCGTTGCCTACGGGTCCCGCTCCAGTGAGGTCGCCGGCCTGGTCAGACGTCTGAGCAAGCGCCTGCCCGCCGTGACGCCCAACC CGAACATGAGCGGCCTGTCGGTGCTGTATGGCGTACAAAGCGACGACGACGGGGCCTTGATCGCGACGCACCTGGCGATGGTCGTGCACAAGACCGGCCA GCGCACACTGCTGCTGGACCTCGGCCTGCCACGCGGCGACAGCCTGTTGATGCTCGGTCTTGAATCGACCTTCAGCTTCGGTGACGCCCTGCGCCACTTG CGCAGGCTCGATGCAACGCTGATCGACAGCGCCTTCACCACCAGCGAAAGCGGCCTGCGCATTCTGGCCTACAGCGAAGCCGACGATCATCTGGAACAGT CCAGCGCCGCCGAGCTTTATATGCTGCTCAGCGCACTGCGCCAGCATTTTCAGCATGTGGTCGTGAACCTGGTGGGGCAGCCGGACAGCGAGGCCTTGCG CTCGCTGGTCAGCCATTGCGATCAGTTGCTGTGGTACACCGACCAGAGCGTGCTGGGCTGTCGACGCAACCTGACGGTGCTCAACAACTGGCGCGAAAAA GGCATGAAAATGCAGCACGCCAGCCTGCTGGTCGATCGCTATCAGCGCTCGGTTGCACCCAATTCCGAAACCGTGAGCAAAACCTTCGGCCTGCCGGTGC TGGCGGTACTGCCGCTTGCCCCGGAGCTGCGCCTCAACGCCAAGAATCAGGGCGTGACGCTGTTCGAACTGGCCTCACGCGACGCTCTGTGCTCCGGGCT GCGGCGGCTTGGCGAGCATTTGGCACGGCATGCCGAGGCACGCGAGAAACCCGATCAGGGCTGGCTCGCTCGACTGTGGGGGAACCGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCGGAGAAACTGTTTGGCGTCTCATCGCGCACGCAAGGCAAGCCTGACGACGGGCAAGGCCTGAAACTGGTGCTGCACCGTTACATCATCGATGGCAT GGAGGAAAGCGGCAAAAGTCTGCTCGAAGGCTCAAGGCCAGCCCTGGCGCAATTCGTCATCGACAAGGTGGCCGAATACGTCGCACGGCTGCGGCTGGCC ATCTCGCGTTACGAAATGGAGCGCCTGGCTGAAGAGCTGGTCGATGAACTGACCGGCTTCGGCCCACTGGAAGTGCTGCTGCGCGACACTTCGGTGACGG AAATCCTGGTCAACGGGCCAGGCAAGGTATTTGTCGAGCGCGATGGCGTGCTGCACCACACCGACCTGCGCTTTATCGATTCACACCATGTCGAGCGCGT GATGCAGCGCATCCTGGCACCACTCGGGCGCCGCCTGGACGAATCCTCACCGATGGTCGATGCGCGTCTGCCCGATGGCAGCCGGGTCAACGCGATCATT
Amino Acid Sequence
>pilus assembly protein CpaE
MSQSLSQTFLAITRNNTDLEWLQSALGSLGQVVSAGTGSLDDLLALVDVTFASVVFVGLDREHLMTQSALIESALEAKPMLAIVALGDGMDNQLVLNAMR AGARDFVAYGSRSSEVAGLVRRLSKRLPAVTPNPNMSGLSVLYGVQSDDDGALIATHLAMVVHKTGQRTLLLDLGLPRGDSLLMLGLESTFSFGDALRHL RRLDATLIDSAFTTSESGLRILAYSEADDHLEQSSAAELYMLLSALRQHFQHVVVNLVGQPDSEALRSLVSHCDQLLWYTDQSVLGCRRNLTVLNNWREK GMKMQHASLLVDRYQRSVAPNSETVSKTFGLPVLAVLPLAPELRLNAKNQGVTLFELASRDALCSGLRRLGEHLARHAEAREKPDQGWLARLWGNR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site