Pseudomonas syringae BRIP39023, A988_03933
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCTGGCAATGTGGAAGTGAATGGTGCGCTCCTTCAGGCAGAGGATCATTGCGATGTCGCCAGCTGTTTTGCCTTCAGCGGACCATTTGAGGACTTCGA TTTCTCTCTGAGTCAGGTTTTTTGCTGGCGAGGGCTGTGAGAAATTTATGTCCATCGTGTTCATGTAGCCTCCTTGCAGTACGTGTACAGACCTTGCTGG GTGTTTATCCAGTTTAGGGACAAATACGTGGCAGTCCGTGGTGGCGCGGATCAGCCGGACGGATGGGCTGATGGCACTTGGCAGCGTGTTCTGGGGCTGT CGGCTGAAACCCACGCGCGAGAAGGGTCGGGGTAATCGGCTCTGTGGATGTTCGACCCTGCAAGGGCTGATCCAAGAACCAAATACTCTAAGCTGCAGAG CCCGTTGCCGGGTAATCCATCACAAACAGCCGGTGTTTATCGAGCCTGCTTTGCGGGACACTGGGCGCTGCTTTCCATATTCAGGAGTTCAAAGCGCACC
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| DNA Sequence for Gene |
>A988_03933
ATGACCGTCAGTGACGACAAATTCACCCGACAGACACTGCAGCGTGTCACGCCGCTGACCGCGAACCTGTTCACCCTGCGTACCACGCGTGATCCCGGTT TTCGCTTTCGTGCCGGACAGTTTGCGCGTCTCGGGGTGACCAAGGCCGACGGCACGGTGGTATGGCGTGCCTATTCGATGGTTTCTTCTCCGCACGATGA GTTTCTGGAGTTTTTTTCCATCGTGGTGCCGGATGGCGAATTCACCAGCGAGTTGAGCCGCTTGCGTGAGGGCGACAGTCTGTTGTTGGAAAAGCAGGCG TTTGGTTATCTGACTCTGGATCGTTTCATTGACGGTCGCGATCTCTGGCTGTTATCCACAGGCACTGGGGTCGCACCGTTTCTGTCGATCCTTCAGGATT TCGAGGTCTGGGAGAAGTTCGAGCGGGTGATTCTGGTGTACAGCGTTCGTGAGTCGCGCGAGCTGGCCTATCAGCAATTGATTGCCGAACTGATGCAGCG TGAGTATCTGGCTGAATACGCGGACAAGTTTCTGTTTTTGCCTACGGTGACCCGCGAGCAGCATCCGGGTGCATTGAATGGGCGTATCACGCAGTTGATC GAAAACGGAGAGCTGGAGCGCGCTGCCGGTATTGCCCTCACGCCGGAGCATTCGCGGGTGATGTTGTGTGGCAATCCGCAGATGATCGATGACACTCGGG CGATTCTCAAGCAGCGCGAGATGCGCTTGAGCCTGTCACGCAAGCCTGGGCAAGTGGCGGTGGAAACGTATTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCTGGCAGCTGGCTATGGCTATGGCTATCGTGCCGAGCATTGGCACGATAGTCACATAACTATCGTTCCTCACGCTCCGCGTGGGAATGCAGTTCATG ACGCTCCGCGTCACACAGCGGCTTTTCTTTGTCAGGCGGATCAGCGCCAGGACGCAGCCGTCACTTACGTCGCAATTTGCGTCGTCAGTGACATCGCGGT TGAAAAGCGCTGCATGGGGGCGATGGCCTGCAGGTGCAGGCCTTACTCAATCAAGGCGTACGCGCAGGATCCACGGTAATGGGCGCTGCCGGTTTGCTCT GCTCCTTGAGCAGGTCGCGGATTTCGCTCAGCAGGATTTCCTGCTTGGTGGGCGTTGGCGGCAGGGTAGGCGCTTTGGCTTCTTCGCGTTTCAGGCGGTT GATGGCCTTGACGCCCATGAAGATCGCGAACGCGACGATGATGAAGTCGATAACGGTCTGGATGAACTTGCCGTAAGCCAGCAGTACCGCAGGTGCGGTC
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| Amino Acid Sequence |
>oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region
MTVSDDKFTRQTLQRVTPLTANLFTLRTTRDPGFRFRAGQFARLGVTKADGTVVWRAYSMVSSPHDEFLEFFSIVVPDGEFTSELSRLREGDSLLLEKQA FGYLTLDRFIDGRDLWLLSTGTGVAPFLSILQDFEVWEKFERVILVYSVRESRELAYQQLIAELMQREYLAEYADKFLFLPTVTREQHPGALNGRITQLI ENGELERAAGIALTPEHSRVMLCGNPQMIDDTRAILKQREMRLSLSRKPGQVAVETYW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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